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Project measure / variable:   Project1194   OF_vertical_activity_time__0_5min__s

ID, description, units MPD:129162   OF_vertical_activity_time__0_5min__s   OF_vertical_activity_time__0_5min__s    
Data set, strains Project1194   other   10 strains     sex: both
Procedure None
Ontology mappings


  STRAIN COMPARISON PLOT
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Project1194 - OF_vertical_activity_time__0_5min__s



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested10 strains10 strains
Mean of the strain means30.3   None 29.468   None
Median of the strain means29.722   None 29.549   None
SD of the strain means± 10.753 ± 8.213
Coefficient of variation (CV)0.3549 0.2787
Min–max range of strain means13.353   –   53.72   None 16.391   –   44.79   None
Mean sample size per strain10.3   mice 10.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 13.3311 13.3311 0.1459 0.7029
strain 9 9153.5544 1017.0616 11.131 < 0.0001
sex:strain 9 2384.2828 264.9203 2.8994 0.0031
Residuals 183 16721.0534 91.3719


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
C57BL/6J f 22.157 5.7862   19 1.3274 0.2611 9.3, 32.21 -0.76
C57BL/6J m 26.572 6.9009   17 1.6737 0.2597 15.55, 44.46 -0.35
GAIA/NachJ f 38.689 7.4826   10 2.3662 0.1934 29.36, 54.98 0.78
GAIA/NachJ m 36.033 8.837   15 2.2817 0.2452 26.27, 59.84 0.8
GAIC/NachJ f 31.02 17.324   2   12.25 0.5585 18.77, 43.27 0.07
GAIC/NachJ m 44.79 0.42426   2   0.3 0.0095 44.49, 45.09 1.87
MANB/NachJ f 28.424 7.529   10 2.3809 0.2649 18.14, 40.51 -0.17
MANB/NachJ m 21.943 7.2006   8 2.5458 0.3282 10.04, 33.29 -0.92
MANE/NachJ f 32.684 10.562   5 4.7235 0.3232 18.19, 44.24 0.22
MANE/NachJ m 22.282 11.201   6 4.573 0.5027 8.35, 41.25 -0.87
MANF/NachJ f 32.282 11.277   20 2.5215 0.3493 14.71, 51.57 0.18
MANF/NachJ m 34.224 11.571   13 3.2092 0.3381 17.67, 54.81 0.58
SARA/NachJ f 13.353 5.3433   3 3.0849 0.4001 7.21, 16.92 -1.58
SARA/NachJ m 16.391 6.873   8 2.43 0.4193 9.2, 26.87 -1.59
SARB/NachJ f 26.971 16.883   8 5.9689 0.6259 6.77, 58.08 -0.31
SARB/NachJ m 33.351 7.8192   11 2.3576 0.2345 22.4, 44.33 0.47
SARC/NachJ f 23.701 9.522   19 2.1845 0.4018 6.16, 42.3 -0.61
SARC/NachJ m 28.161 8.8537   17 2.1473 0.3144 14.04, 46.02 -0.16
TUCB/NachJ f 53.72 14.215   7 5.3726 0.2646 31.2, 75.83 2.18
TUCB/NachJ m 30.937 14.084   3 8.1314 0.4553 19.45, 46.65 0.18


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ 1 28.424 3.0227781334 34.387977274 22.460022726
129S1/SvImJ 2 21.9425 3.3795686936 28.6104293005 15.2745706995
A/J 1 32.684 4.2748538323 41.1183375466 24.2496624534
A/J 2 22.2816666667 3.90238979 29.9811282198 14.5822051135
BALB/cJ 1 32.282 2.1374269161 36.4991687733 28.0648312267
BALB/cJ 2 34.2238461538 2.6511518025 39.454600249 28.9930920587
BTBR T+ Itpr3tf/J 1 38.689 3.0227781334 44.652977274 32.725022726
BTBR T+ Itpr3tf/J 2 36.0326666667 2.4680880108 40.9022337196 31.1630996137
C3H/HeJ 1 13.3533333333 5.5188125666 24.2420162847 2.4646503819
C3H/HeJ 2 16.39125 3.3795686936 23.0591793005 9.7233206995
C57BL/6J 1 53.7242857143 3.6129109047 60.8526019776 46.595969451
C57BL/6J 2 30.9366666667 5.5188125666 41.8253496181 20.0479837153
CAST/EiJ 1 31.02 6.7591373872 44.3558586009 17.6841413991
CAST/EiJ 2 44.79 6.7591373872 58.1258586009 31.4541413991
DBA/2J 1 26.97125 3.3795686936 33.6391793005 20.3033206995
DBA/2J 2 33.3509090909 2.8821058658 39.0373383048 27.664479877
FVB/NJ 1 23.7010526316 2.1929537451 28.0277765001 19.3743287631
FVB/NJ 2 28.1611764706 2.3183649974 32.735338234 23.5870147071
LP/J 1 22.1568421053 2.1929537451 26.4835659737 17.8301182368
LP/J 2 26.5717647059 2.3183649974 31.1459264693 21.9976029424


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 25.18325 2.2670836 29.6562329555 20.7102670445
A/J both 27.4828333333 2.8940897256 33.1929068455 21.7727598212
BALB/cJ both 33.2529230769 1.7027330752 36.6124357226 29.8934104312
BTBR T+ Itpr3tf/J both 37.3608333333 1.951194895 41.2105641099 33.5111025568
C3H/HeJ both 14.8722916667 3.2356906798 21.2563479315 8.4882354018
C57BL/6J both 42.3304761905 3.2981213346 48.8377088812 35.8232434997
CAST/EiJ both 37.905 4.7794318814 47.3348760497 28.4751239503
DBA/2J both 30.1610795455 2.2208117196 34.5427675296 25.7793915613
FVB/NJ both 25.9311145511 1.5956082218 29.0792685845 22.7829605177
LP/J both 24.3643034056 1.5956082218 27.512457439 21.2161493722




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA