Project measure / variable:   Project1194   lightdark_vertical_episode_count__whole_body__dark_

ID, description, units MPD:129148   lightdark_vertical_episode_count__whole_body__dark_   lightdark_vertical_episode_count__whole_body__dark_    
Data set, strains Project1194   other   10 strains     sex: both
Procedure None
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  STRAIN COMPARISON PLOT
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Project1194 - lightdark_vertical_episode_count__whole_body__dark_



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested10 strains10 strains
Mean of the strain means14.568   None 12.511   None
Median of the strain means14.671   None 12.311   None
SD of the strain means± 3.5867 ± 4.6238
Coefficient of variation (CV)0.2462 0.3696
Min–max range of strain means8.119   –   18.5   None 6.25   –   22.767   None
Mean sample size per strain10.7   mice 10.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 25.9357 25.9357 0.3741 0.5415
strain 9 3458.8117 384.3124 5.5433 < 0.0001
sex:strain 9 772.7296 85.8588 1.2384 0.2736
Residuals 194 13449.8793 69.3293


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
C57BL/6J f 8.119 4.6339   21 1.0112 0.5707 1.0, 22.0 -1.8
C57BL/6J m 8.25 3.8413   22 0.81898 0.4656 2.0, 19.5 -0.92
GAIA/NachJ f 18.35 5.3232   10 1.6833 0.2901 7.5, 24.5 1.05
GAIA/NachJ m 22.767 6.9407   15 1.7921 0.3049 13.0, 43.0 2.22
GAIC/NachJ f 15.0 4.3301   3 2.5 0.2887 10.0, 17.5 0.12
GAIC/NachJ m 13.0 5.6569   2   4.0 0.4351 9.0, 17.0 0.11
MANB/NachJ f 18.227 27.788   11 8.3784 1.5245 3.0, 101.5 1.02
MANB/NachJ m 11.4 3.3977   10 1.0745 0.298 6.5, 17.0 -0.24
MANE/NachJ f 11.1 2.5836   5 1.1554 0.2328 9.0, 15.0 -0.97
MANE/NachJ m 9.2 7.799   5 3.4878 0.8477 2.0, 21.5 -0.72
MANF/NachJ f 11.1 3.7543   20 0.83949 0.3382 4.5, 17.5 -0.97
MANF/NachJ m 13.0 6.245   12 1.8028 0.4804 2.0, 24.0 0.11
SARA/NachJ f 13.875 7.7069   4 3.8534 0.5555 5.5, 23.0 -0.19
SARA/NachJ m 6.25 3.5375   10 1.1187 0.566 2.0, 14.5 -1.35
SARB/NachJ f 17.071 11.509   7 4.3499 0.6742 4.5, 38.0 0.7
SARB/NachJ m 11.955 2.0791   11 0.62688 0.1739 7.5, 16.0 -0.12
SARC/NachJ f 14.342 4.4536   19 1.0217 0.3105 6.5, 22.0 -0.06
SARC/NachJ m 16.618 8.5377   17 2.0707 0.5138 4.0, 41.5 0.89
TUCB/NachJ f 18.5 6.6332   7 2.5071 0.3586 5.0, 24.0 1.1
TUCB/NachJ m 12.667 1.2583   3 0.72648 0.0993 11.5, 14.0 0.03


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ 1 18.2272727273 2.5105101733 23.1786704324 13.2758750222
129S1/SvImJ 2 11.4 2.6330452832 16.5930697239 6.2069302761
A/J 1 11.1 3.7236883499 18.4441096339 3.7558903661
A/J 2 9.2 3.7236883499 16.5441096339 1.8558903661
BALB/cJ 1 11.1 1.8618441749 14.772054817 7.427945183
BALB/cJ 2 13.0 2.4036304943 17.7406023842 8.2593976158
BTBR T+ Itpr3tf/J 1 18.35 2.6330452832 23.5430697239 13.1569302761
BTBR T+ Itpr3tf/J 2 22.7666666667 2.1498724712 27.0067903408 18.5265429926
C3H/HeJ 1 13.875 4.1632101387 22.0859641878 5.6640358122
C3H/HeJ 2 6.25 2.6330452832 11.4430697239 1.0569302761
C57BL/6J 1 18.5 3.1470910522 24.7069055043 12.2930944957
C57BL/6J 2 12.6666666667 4.8072609885 22.147871435 3.1854618984
CAST/EiJ 1 15.0 4.8072609885 24.4812047683 5.5187952317
CAST/EiJ 2 13.0 5.8876682411 24.6120569146 1.3879430854
DBA/2J 1 17.0714285714 3.1470910522 23.2783340757 10.8645230671
DBA/2J 2 11.9545454545 2.5105101733 16.9059431597 7.0031477494
FVB/NJ 1 14.3421052632 1.9102118184 18.109554013 10.5746565133
FVB/NJ 2 16.6176470588 2.0194535463 20.6005497217 12.6347443959
LP/J 1 8.119047619 1.8169738661 11.7026061828 4.5354890553
LP/J 2 8.25 1.7751987678 11.7511668936 4.7488331064


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 14.8136363636 1.8190374374 18.4012648419 11.2260078854
A/J both 10.15 2.6330452832 15.3430697239 4.9569302761
BALB/cJ both 12.05 1.5201894031 15.048220203 9.051779797
BTBR T+ Itpr3tf/J both 20.5583333333 1.699623422 23.9104454261 17.2062212406
C3H/HeJ both 10.0625 2.4629883334 14.9201719231 5.2048280769
C57BL/6J both 15.5833333333 2.872887933 21.2494369284 9.9172297383
CAST/EiJ both 14.0 3.8004735077 21.4955505076 6.5044494924
DBA/2J both 14.512987013 2.0128862003 18.4829371126 10.5430369134
FVB/NJ both 15.479876161 1.389883252 18.221097773 12.738654549
LP/J both 8.1845238095 1.2701106936 10.6895218932 5.6795257258




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA