Project measure / variable:   Project1194   lightdark_vertical_activity_count__query__dark_

ID, description, units MPD:129130   lightdark_vertical_activity_count__query__dark_   lightdark_vertical_activity_count__query__dark_    
Data set, strains Project1194   other   10 strains     sex: both
Procedure None
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  STRAIN COMPARISON PLOT
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Project1194 - lightdark_vertical_activity_count__query__dark_



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested10 strains10 strains
Mean of the strain means26.662   None 24.058   None
Median of the strain means25.017   None 21.666   None
SD of the strain means± 9.6323 ± 13.051
Coefficient of variation (CV)0.3613 0.5425
Min–max range of strain means11.238   –   43.25   None 10.9   –   55.97   None
Mean sample size per strain10.7   mice 10.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 125.2994 125.2994 0.5929 0.4422
strain 9 27569.607 3063.2897 14.4961 < 0.0001
sex:strain 9 4030.7788 447.8643 2.1194 0.0296
Residuals 194 40995.613 211.3176


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
C57BL/6J f 11.238 6.1004   21 1.3312 0.5428 2.0, 23.5 -1.6
C57BL/6J m 13.545 6.5772   22 1.4023 0.4856 2.5, 33.5 -0.81
GAIA/NachJ f 43.25 22.321   10 7.0586 0.5161 14.5, 95.5 1.72
GAIA/NachJ m 55.97 23.65   15 6.1063 0.4226 28.0, 124.0 2.45
GAIC/NachJ f 26.0 12.679   3 7.3201 0.4876 11.5, 35.0 -0.07
GAIC/NachJ m 22.25 12.374   2   8.75 0.5562 13.5, 31.0 -0.14
MANB/NachJ f 19.455 12.858   11 3.8768 0.6609 3.0, 54.5 -0.75
MANB/NachJ m 19.0 7.4759   10 2.3641 0.3935 7.5, 30.5 -0.39
MANE/NachJ f 21.3 11.256   5 5.0339 0.5285 12.5, 35.5 -0.56
MANE/NachJ m 15.1 12.152   5 5.4346 0.8048 6.5, 35.0 -0.69
MANF/NachJ f 21.562 8.9809   20 2.0082 0.4165 6.5, 38.5 -0.53
MANF/NachJ m 26.125 15.935   12 4.6 0.6099 2.5, 62.0 0.16
SARA/NachJ f 24.875 13.009   4 6.5044 0.523 7.5, 38.0 -0.19
SARA/NachJ m 10.9 10.005   10 3.1639 0.9179 3.5, 37.5 -1.01
SARB/NachJ f 36.786 38.956   7 14.724 1.059 7.0, 117.5 1.05
SARB/NachJ m 21.5 5.2631   11 1.5869 0.2448 13.5, 34.5 -0.2
SARC/NachJ f 25.158 8.0778   19 1.8532 0.3211 7.0, 38.0 -0.16
SARC/NachJ m 34.353 18.339   17 4.4478 0.5338 6.5, 82.5 0.79
TUCB/NachJ f 37.0 16.422   7 6.2068 0.4438 9.0, 63.0 1.07
TUCB/NachJ m 21.833 2.2546   3 1.3017 0.1033 19.5, 24.0 -0.17


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ 1 19.4545454545 4.3830001407 28.0989943273 10.8100965818
129S1/SvImJ 2 19.0 4.596929329 28.0663744653 9.9336255347
A/J 1 21.3 6.5010398024 34.1217897303 8.4782102697
A/J 2 15.1 6.5010398024 27.9217897303 2.2782102697
BALB/cJ 1 21.5625 3.2505199012 27.9733948652 15.1516051348
BALB/cJ 2 26.125 4.196403148 34.4014296823 17.8485703177
BTBR T+ Itpr3tf/J 1 43.25 4.596929329 52.3163744653 34.1836255347
BTBR T+ Itpr3tf/J 2 55.9666666667 3.7533770799 63.369330419 48.5640029144
C3H/HeJ 1 24.875 7.2683834613 39.2101967151 10.5398032849
C3H/HeJ 2 10.9 4.596929329 19.9663744653 1.8336255347
C57BL/6J 1 37.0 5.4943814492 47.8363901438 26.1636098562
C57BL/6J 2 21.8333333333 8.3928062959 38.386192698 5.2804739686
CAST/EiJ 1 26.0 8.3928062959 42.5528593647 9.4471406353
CAST/EiJ 2 22.25 10.2790464675 42.5230296138 1.9769703862
DBA/2J 1 36.7857142857 5.4943814492 47.6221044295 25.9493241419
DBA/2J 2 21.5 4.3830001407 30.1444488727 12.8555511273
FVB/NJ 1 25.1578947368 3.3349630517 31.735334086 18.5804553877
FVB/NJ 2 34.3529411765 3.5256838516 41.3065329671 27.3993493858
LP/J 1 11.2380952381 3.1721826087 17.4944880047 4.9817024715
LP/J 2 13.5454545455 3.0992491214 19.658002963 7.4329061279


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 19.2272727273 3.1757853158 25.4907709962 12.9637744584
A/J both 18.2 4.596929329 27.2663744653 9.1336255347
BALB/cJ both 23.84375 2.6540383856 29.0782237381 18.6092762619
BTBR T+ Itpr3tf/J both 49.6083333333 2.9673051225 55.4606528857 43.7560137809
C3H/HeJ both 17.8875 4.3000336451 26.3683167473 9.4066832527
C57BL/6J both 29.4166666667 5.0156610987 39.3088922062 19.5244411272
CAST/EiJ both 24.125 6.6350959639 37.2111843452 11.0388156548
DBA/2J both 29.1428571429 3.5142181827 36.073835567 22.2118787187
FVB/NJ both 29.7554179567 2.4265420446 34.5412080477 24.9696278656
LP/J both 12.3917748918 2.2174358852 16.7651516937 8.0183980899




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA