Project measure / variable:   Project1194   lightdark_vertical_activity_count__centroid__light_

ID, description, units MPD:129127   lightdark_vertical_activity_count__centroid__light_   lightdark_vertical_activity_count__centroid__light_    
Data set, strains Project1194   other   10 strains     sex: both
Procedure None
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  STRAIN COMPARISON PLOT
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Project1194 - lightdark_vertical_activity_count__centroid__light_



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested10 strains10 strains
Mean of the strain means44.18   None 47.163   None
Median of the strain means46.143   None 42.459   None
SD of the strain means± 13.579 ± 16.321
Coefficient of variation (CV)0.3074 0.346
Min–max range of strain means21.619   –   68.0   None 28.568   –   75.0   None
Mean sample size per strain10.7   mice 10.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 368.9766 368.9766 1.1691 0.2809
strain 9 37437.5848 4159.7316 13.1806 < 0.0001
sex:strain 9 4186.6939 465.1882 1.474 0.1599
Residuals 194 61225.2727 315.5942


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
C57BL/6J f 21.619 18.138   21 3.9581 0.839 1.0, 84.5 -1.66
C57BL/6J m 28.568 12.381   22 2.6397 0.4334 11.0, 55.0 -1.14
GAIA/NachJ f 68.0 14.302   10 4.5228 0.2103 47.0, 96.0 1.75
GAIA/NachJ m 63.63 12.533   15 3.2361 0.197 44.0, 89.0 1.01
GAIC/NachJ f 50.67 14.742   3 8.5114 0.291 34.0, 62.0 0.48
GAIC/NachJ m 75.0 16.263   2   11.5 0.2168 63.5, 86.5 1.71
MANB/NachJ f 38.091 12.971   11 3.9108 0.3405 18.0, 59.0 -0.45
MANB/NachJ m 40.5 10.921   10 3.4537 0.2697 25.5, 58.0 -0.41
MANE/NachJ f 44.0 7.4078   5 3.3129 0.1684 36.5, 55.0 -0.01
MANE/NachJ m 32.2 19.681   5 8.8014 0.6112 6.0, 58.5 -0.92
MANF/NachJ f 48.75 10.24   20 2.2897 0.21 33.0, 72.0 0.34
MANF/NachJ m 41.125 11.362   12 3.2799 0.2763 24.0, 58.5 -0.37
SARA/NachJ f 27.5 15.138   4 7.5691 0.5505 6.0, 39.5 -1.23
SARA/NachJ m 32.25 19.224   10 6.0792 0.5961 8.0, 65.5 -0.91
SARB/NachJ f 48.286 27.081   7 10.236 0.5609 19.5, 103.5 0.3
SARB/NachJ m 68.73 13.825   11 4.1683 0.2012 47.0, 91.0 1.32
SARC/NachJ f 38.316 23.404   19 5.3693 0.6108 -0.43
SARC/NachJ m 43.794 26.531   17 6.4348 0.6058 -0.21
TUCB/NachJ f 56.57 24.039   7 9.0859 0.4249 24.5, 99.0 0.91
TUCB/NachJ m 45.833 43.79   3 25.282 0.9554 1.0, 88.5 -0.08


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ 1 38.0909090909 5.356340247 48.6550450535 27.5267731283
129S1/SvImJ 2 40.5 5.6177770449 51.5797592709 29.4202407291
A/J 1 44.0 7.9447364872 59.6691458287 28.3308541713
A/J 2 32.2 7.9447364872 47.8691458287 16.5308541713
BALB/cJ 1 48.75 3.9723682436 56.5845729143 40.9154270857
BALB/cJ 2 41.125 5.1283053508 51.2393901406 31.0106098594
BTBR T+ Itpr3tf/J 1 68.0 5.6177770449 79.0797592709 56.9202407291
BTBR T+ Itpr3tf/J 2 63.6333333333 4.5868957495 72.6799188955 54.5867477712
C3H/HeJ 1 27.5 8.8824854244 45.0186376112 9.9813623888
C3H/HeJ 2 32.25 5.6177770449 43.3297592709 21.1702407291
C57BL/6J 1 56.5714285714 6.7145278449 69.8142738365 43.3285833063
C57BL/6J 2 45.8333333333 10.2566107017 66.0621136146 25.6045530521
CAST/EiJ 1 50.6666666667 10.2566107017 70.8954469479 30.4378863854
CAST/EiJ 2 75.0 12.5617313548 99.775094904 50.224905096
DBA/2J 1 48.2857142857 6.7145278449 61.5285595508 35.0428690206
DBA/2J 2 68.7272727273 5.356340247 79.2914086899 58.1631367647
FVB/NJ 1 38.3157894737 4.0755638245 46.3538916816 30.2776872657
FVB/NJ 2 43.7941176471 4.3086383086 52.2919050927 35.2963302014
LP/J 1 21.619047619 3.8766344587 29.2648078977 13.9732873404
LP/J 2 28.5681818182 3.787504511 36.0381539947 21.0982096416


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 39.2954545455 3.881037225 46.9498982571 31.6410108338
A/J both 38.1 5.6177770449 49.1797592709 27.0202407291
BALB/cJ both 44.9375 3.2434250891 51.3344019976 38.5405980024
BTBR T+ Itpr3tf/J both 65.8166666667 3.6262594896 72.9686205227 58.6647128107
C3H/HeJ both 29.875 5.2549492443 40.2391657799 19.5108342201
C57BL/6J both 51.2023809524 6.1294972727 63.2913894144 39.1133724903
CAST/EiJ both 62.8333333333 8.1085627227 78.8255883273 46.8410783394
DBA/2J both 58.5064935065 4.2946264396 66.9766457978 50.0363412152
FVB/NJ both 41.0549535604 2.9654082586 46.9035319897 35.206375131
LP/J both 25.0936147186 2.7098655477 30.4381945561 19.7490348811




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA