Project measure / variable:   Project1194   lightdark_stereotypic_episode_count__centroid__light_

ID, description, units MPD:129087   lightdark_stereotypic_episode_count__centroid__light_   lightdark_stereotypic_episode_count__centroid__light_    
Data set, strains Project1194   other   10 strains     sex: both
Procedure None
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  STRAIN COMPARISON PLOT
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Project1194 - lightdark_stereotypic_episode_count__centroid__light_



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested10 strains10 strains
Mean of the strain means17.48   None 18.081   None
Median of the strain means16.163   None 18.004   None
SD of the strain means± 4.0513 ± 5.0067
Coefficient of variation (CV)0.2318 0.2769
Min–max range of strain means11.571   –   23.7   None 10.0   –   25.045   None
Mean sample size per strain10.7   mice 10.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 185.5166 185.5166 6.0049 0.0152
strain 9 2052.1281 228.0142 7.3805 < 0.0001
sex:strain 9 359.0808 39.8979 1.2914 0.2436
Residuals 194 5993.4769 30.8942


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
C57BL/6J f 19.714 5.243   21 1.1441 0.266 11.0, 35.0 0.55
C57BL/6J m 21.886 5.97   22 1.2728 0.2728 12.0, 34.0 0.76
GAIA/NachJ f 20.4 5.8869   10 1.8616 0.2886 12.5, 33.5 0.72
GAIA/NachJ m 17.567 3.6978   15 0.95477 0.2105 10.5, 23.5 -0.1
GAIC/NachJ f 16.167 9.815   3 5.6667 0.6071 10.5, 27.5 -0.32
GAIC/NachJ m 11.0 6.364   2   4.5 0.5785 6.5, 15.5 -1.41
MANB/NachJ f 14.727 5.1252   11 1.5453 0.348 7.5, 25.5 -0.68
MANB/NachJ m 17.2 6.1923   10 1.9582 0.36 6.5, 28.5 -0.18
MANE/NachJ f 23.7 2.4648   5 1.1023 0.104 21.0, 27.5 1.54
MANE/NachJ m 23.3 4.9825   5 2.2282 0.2138 17.5, 28.0 1.04
MANF/NachJ f 15.988 4.0979   20 0.91631 0.2563 10.0, 24.5 -0.37
MANF/NachJ m 15.125 4.0515   12 1.1696 0.2679 6.5, 22.5 -0.59
SARA/NachJ f 13.375 5.1051   4 2.5526 0.3817 6.5, 18.5 -1.01
SARA/NachJ m 21.25 7.4731   10 2.3632 0.3517 10.0, 35.5 0.63
SARB/NachJ f 23.0 6.4743   7 2.4471 0.2815 11.0, 32.0 1.36
SARB/NachJ m 25.045 5.5563   11 1.6753 0.2218 15.0, 38.0 1.39
SARC/NachJ f 16.158 6.5871   19 1.5112 0.4077 3.5, 25.5 -0.33
SARC/NachJ m 18.441 6.1945   17 1.5024 0.3359 2.0, 25.0 0.07
TUCB/NachJ f 11.571 5.4193   7 2.0483 0.4683 3.0, 20.0 -1.46
TUCB/NachJ m 10.0 2.7839   3 1.6073 0.2784 7.0, 12.5 -1.61


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ 1 14.7272727273 1.6758772643 18.0325510443 11.4219944102
129S1/SvImJ 2 17.2 1.7576749033 20.6666051446 13.7333948554
A/J 1 23.7 2.4857276865 28.6025200108 18.7974799892
A/J 2 23.3 2.4857276865 28.2025200108 18.3974799892
BALB/cJ 1 15.9875 1.2428638432 18.4387600054 13.5362399946
BALB/cJ 2 15.125 1.6045303221 18.2895630594 11.9604369406
BTBR T+ Itpr3tf/J 1 20.4 1.7576749033 23.8666051446 16.9333948554
BTBR T+ Itpr3tf/J 2 17.5666666667 1.4351355489 20.3971379146 14.7361954187
C3H/HeJ 1 13.375 2.7791280402 18.8561840026 7.8938159974
C3H/HeJ 2 21.25 1.7576749033 24.7166051446 17.7833948554
C57BL/6J 1 11.5714285714 2.1008233303 15.7148142175 7.4280429254
C57BL/6J 2 10.0 3.2090606443 16.3291261188 3.6708738812
CAST/EiJ 1 16.1666666667 3.2090606443 22.4957927855 9.8375405479
CAST/EiJ 2 11.0 3.9302805661 18.7515647544 3.2484352456
DBA/2J 1 23.0 2.1008233303 27.143385646 18.856614354
DBA/2J 2 25.0454545455 1.6758772643 28.3507328625 21.7401762284
FVB/NJ 1 16.1578947368 1.2751513977 18.6728344377 13.642955036
FVB/NJ 2 18.4411764706 1.3480751126 21.0999412466 15.7824116946
LP/J 1 19.7142857143 1.2129109153 22.1064705324 17.3221008962
LP/J 2 21.8863636364 1.185024178 24.223548348 19.5491789247


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 15.9636363636 1.2142884409 18.3585380308 13.5687346965
A/J both 23.5 1.7576749033 26.9666051446 20.0333948554
BALB/cJ both 15.55625 1.0147940786 17.5576954134 13.5548045866
BTBR T+ Itpr3tf/J both 18.9833333333 1.1345742714 21.2210173321 16.7456493345
C3H/HeJ both 17.3125 1.6441543213 20.5552121865 14.0697878135
C57BL/6J both 10.7857142857 1.9177805456 14.5680905904 7.0033379811
CAST/EiJ both 13.5833333333 2.5369851964 18.5869468668 8.5797197999
DBA/2J both 24.0227272727 1.3436911169 26.6728456364 21.3726089091
FVB/NJ both 17.2995356037 0.9278089238 19.1294230206 15.4696481869
LP/J both 20.8003246753 0.8478554109 22.4725223745 19.1281269762




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA