Project measure / variable:   Project1194   lightdark_stereotypic_episode_activity_count__query__light_

ID, description, units MPD:129083   lightdark_stereotypic_episode_activity_count__query__light_   lightdark_stereotypic_episode_activity_count__query__light_    
Data set, strains Project1194   other   10 strains     sex: both
Procedure None
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  STRAIN COMPARISON PLOT
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Project1194 - lightdark_stereotypic_episode_activity_count__query__light_



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested10 strains10 strains
Mean of the strain means390.6   None 366.1   None
Median of the strain means363.9   None 321.0   None
SD of the strain means± 103.7 ± 125.2
Coefficient of variation (CV)0.2653 0.3419
Min–max range of strain means278.1   –   569.0   None 207.7   –   521.1   None
Mean sample size per strain10.7   mice 10.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 10425.8864 10425.8864 0.6108 0.4354
strain 9 2161686.9967 240187.4441 14.072 < 0.0001
sex:strain 9 189133.0487 21014.7832 1.2312 0.2779
Residuals 194 3311279.4615 17068.4508


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
C57BL/6J f 480.6 170.6   21 37.226 0.355 163.5, 723.0 0.87
C57BL/6J m 521.1 164.3   22 35.036 0.3154 194.5, 812.0 1.24
GAIA/NachJ f 430.2 100.4   10 31.756 0.2334 286.5, 618.5 0.38
GAIA/NachJ m 323.9 62.69   15 16.186 0.1935 234.0, 411.0 -0.34
GAIC/NachJ f 344.3 127.5   3 73.62 0.3703 200.5, 443.5 -0.45
GAIC/NachJ m 243.5 101.8   2   72.0 0.4182 171.5, 315.5 -0.98
MANB/NachJ f 278.1 103.4   11 31.186 0.3719 152.0, 463.0 -1.09
MANB/NachJ m 318.1 117.7   10 37.231 0.3701 92.5, 509.5 -0.38
MANE/NachJ f 569.0 84.56   5 37.815 0.1486 506.5, 717.5 1.72
MANE/NachJ m 493.8 148.5   5 66.41 0.3007 316.5, 641.5 1.02
MANF/NachJ f 282.6 73.81   20 16.505 0.2612 144.0, 414.0 -1.04
MANF/NachJ m 258.4 68.18   12 19.682 0.2639 137.5, 374.5 -0.86
SARA/NachJ f 383.4 85.32   4 42.659 0.2225 294.5, 474.0 -0.07
SARA/NachJ m 504.8 178.0   10 56.3 0.3527 223.0, 796.0 1.11
SARB/NachJ f 516.6 179.7   7 67.91 0.3478 212.5, 820.0 1.22
SARB/NachJ m 504.3 137.5   11 41.46 0.2727 347.5, 808.0 1.1
SARC/NachJ f 304.1 149.2   19 34.231 0.4907 20.0, 555.0 -0.83
SARC/NachJ m 285.2 104.2   17 25.28 0.3655 41.0, 388.0 -0.65
TUCB/NachJ f 317.6 166.2   7 62.83 0.5235 115.5, 621.5 -0.7
TUCB/NachJ m 207.7 141.3   3 81.58 0.6804 57.5, 338.0 -1.27


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ 1 278.0909090909 39.391335956 355.7811620621 200.4006561198
129S1/SvImJ 2 318.1 41.3139816919 399.5822247327 236.6177752673
A/J 1 569.0 58.4267932244 684.2332673093 453.7667326907
A/J 2 493.8 58.4267932244 609.0332673093 378.5667326907
BALB/cJ 1 282.59 29.2133966122 340.2066336547 224.9733663453
BALB/cJ 2 258.375 37.7143328551 332.757754203 183.992245797
BTBR T+ Itpr3tf/J 1 430.2 41.3139816919 511.6822247327 348.7177752673
BTBR T+ Itpr3tf/J 2 323.9 33.732724796 390.4299579006 257.3700420994
C3H/HeJ 1 383.375 65.3231406785 512.2097094865 254.5402905135
C3H/HeJ 2 504.8 41.3139816919 586.2822247327 423.3177752673
C57BL/6J 1 317.5714285714 49.3796528837 414.9613147242 220.1815424187
C57BL/6J 2 207.6666666667 75.4286657101 356.4321750727 58.9011582606
CAST/EiJ 1 344.3333333333 75.4286657101 493.0988417394 195.5678249273
CAST/EiJ 2 243.5 92.3808714844 425.6997934603 61.3002065397
DBA/2J 1 516.6428571429 49.3796528837 614.0327432956 419.2529709901
DBA/2J 2 504.2727272727 39.391335956 581.9629802439 426.5824743016
FVB/NJ 1 304.0526315789 29.972312515 363.1660504287 244.9392127292
FVB/NJ 2 285.2058823529 31.6863775076 347.6998959363 222.7118687696
LP/J 1 480.5714285714 28.5093558849 536.7995055581 424.3433515848
LP/J 2 521.0909090909 27.8538807745 576.0262137989 466.1556043829


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 298.0954545455 28.5417344937 354.387390811 241.8035182799
A/J both 531.4 41.3139816919 612.8822247327 449.9177752673
BALB/cJ both 270.4825 23.8526384511 317.5262843836 223.4387156164
BTBR T+ Itpr3tf/J both 377.05 26.6680605097 429.6465499003 324.4534500997
C3H/HeJ both 444.0875 38.6456911937 520.3071420155 367.8678579845
C57BL/6J both 262.619047619 45.0772496103 351.5234434836 173.7146517545
CAST/EiJ both 293.9166666667 59.6315961278 411.5261276257 176.3072057077
DBA/2J both 510.4577922078 31.5833321046 572.7485726885 448.1670117271
FVB/NJ both 294.6292569659 21.8080606488 337.6405869322 251.6179269997
LP/J both 500.8311688312 19.9287609197 540.1360169576 461.5263207047




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA