Project measure / variable:   Project1194   lightdark_stereotypic_activity_count__crossover__light_

ID, description, units MPD:129073   lightdark_stereotypic_activity_count__crossover__light_   lightdark_stereotypic_activity_count__crossover__light_    
Data set, strains Project1194   other   10 strains     sex: both
Procedure None
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  STRAIN COMPARISON PLOT
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Project1194 - lightdark_stereotypic_activity_count__crossover__light_



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested10 strains10 strains
Mean of the strain means46.177   None 45.061   None
Median of the strain means44.459   None 46.25   None
SD of the strain means± 12.182 ± 13.987
Coefficient of variation (CV)0.2638 0.3104
Min–max range of strain means27.214   –   67.3   None 19.5   –   65.0   None
Mean sample size per strain10.7   mice 10.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 341.9171 341.9171 1.283 0.2587
strain 9 15595.0117 1732.7791 6.5021 < 0.0001
sex:strain 9 2273.6962 252.6329 0.948 0.4847
Residuals 194 51700.0304 266.495


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
C57BL/6J f 45.619 12.408   21 2.7076 0.272 25.5, 85.5 -0.05
C57BL/6J m 47.75 14.655   22 3.1245 0.3069 26.5, 70.0 0.19
GAIA/NachJ f 55.95 20.503   10 6.4835 0.3664 31.5, 101.0 0.8
GAIA/NachJ m 50.1 18.33   15 4.7329 0.3659 26.5, 86.0 0.36
GAIC/NachJ f 46.333 33.52   3 19.353 0.7235 25.5, 85.0 0.01
GAIC/NachJ m 27.75 10.96   2   7.75 0.395 20.0, 35.5 -1.24
MANB/NachJ f 41.364 19.286   11 5.815 0.4663 19.0, 87.0 -0.4
MANB/NachJ m 44.75 16.358   10 5.1727 0.3655 15.0, 74.0 -0.02
MANE/NachJ f 67.3 7.783   5 3.4807 0.1156 55.0, 74.5 1.73
MANE/NachJ m 61.8 14.541   5 6.5031 0.2353 44.5, 77.0 1.2
MANF/NachJ f 43.3 15.326   20 3.4269 0.3539 25.0, 92.0 -0.24
MANF/NachJ m 38.333 13.722   12 3.9611 0.358 16.0, 69.5 -0.48
SARA/NachJ f 33.25 15.014   4 7.5069 0.4515 13.0, 47.5 -1.06
SARA/NachJ m 52.1 17.37   10 5.4928 0.3334 30.5, 89.0 0.5
SARB/NachJ f 60.57 18.183   7 6.8725 0.3002 25.5, 81.0 1.18
SARB/NachJ m 65.0 16.854   11 5.0816 0.2593 46.0, 108.5 1.43
SARC/NachJ f 40.868 18.728   19 4.2965 0.4583 5.5, 67.5 -0.44
SARC/NachJ m 43.529 15.344   17 3.7216 0.3525 5.0, 63.5 -0.11
TUCB/NachJ f 27.214 13.382   7 5.0578 0.4917 9.0, 50.0 -1.56
TUCB/NachJ m 19.5 8.231   3 4.7522 0.4221 10.0, 24.5 -1.83


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ 1 41.3636363636 4.9220745988 51.0712842879 31.6559884394
129S1/SvImJ 2 44.75 5.1623153906 54.9314670378 34.5685329622
A/J 1 67.3 7.3006164386 81.6987687698 52.9012312302
A/J 2 61.8 7.3006164386 76.1987687698 47.4012312302
BALB/cJ 1 43.3 3.6503082193 50.4993843849 36.1006156151
BALB/cJ 2 38.3333333333 4.7125276473 47.6276986085 29.0389680581
BTBR T+ Itpr3tf/J 1 55.95 5.1623153906 66.1314670378 45.7685329622
BTBR T+ Itpr3tf/J 2 50.1 4.2150128661 58.4131330252 41.7868669748
C3H/HeJ 1 33.25 8.1623373172 49.3483128808 17.1516871192
C3H/HeJ 2 52.1 5.1623153906 62.2814670378 41.9185329622
C57BL/6J 1 27.2142857143 6.1701470453 39.3834664029 15.0451050257
C57BL/6J 2 19.5 9.4250552946 38.0887305504 0.9112694496
CAST/EiJ 1 46.3333333333 9.4250552946 64.9220638837 27.7446027829
CAST/EiJ 2 27.75 11.5432881347 50.5164524073 4.9835475927
DBA/2J 1 60.5714285714 6.1701470453 72.7406092601 48.4022478828
DBA/2J 2 65.0 4.9220745988 74.7076479242 55.2923520758
FVB/NJ 1 40.8684210526 3.7451372115 48.2548335799 33.4820085254
FVB/NJ 2 43.5294117647 3.959315166 51.3382405178 35.7205830116
LP/J 1 45.619047619 3.5623360575 52.6449273654 38.5931678726
LP/J 2 47.75 3.4804323263 54.6143436766 40.8856563234


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 43.0568181818 3.5663818692 50.0906773513 36.0229590124
A/J both 64.55 5.1623153906 74.7314670378 54.3685329622
BALB/cJ both 40.8166666667 2.9804641804 46.6949394017 34.9383939316
BTBR T+ Itpr3tf/J both 53.025 3.332260256 59.5971087129 46.4528912871
C3H/HeJ both 42.675 4.8289038785 52.1988903376 33.1511096624
C57BL/6J both 23.3571428571 5.6325478664 34.4660341397 12.2482515746
CAST/EiJ both 37.0416666667 7.451160451 51.7373485043 22.345984829
DBA/2J both 62.7857142857 3.9464393102 70.5691484065 55.0022801649
FVB/NJ both 42.1989164087 2.7249875833 47.5733209459 36.8245118715
LP/J both 46.6845238095 2.490163015 51.5957914748 41.7732561442




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA