Project measure / variable:   Project1194   lightdark_movement_episode_count__query__dark_

ID, description, units MPD:129042   lightdark_movement_episode_count__query__dark_   lightdark_movement_episode_count__query__dark_    
Data set, strains Project1194   other   10 strains     sex: both
Procedure None
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  STRAIN COMPARISON PLOT
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Project1194 - lightdark_movement_episode_count__query__dark_



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested10 strains10 strains
Mean of the strain means41.955   None 38.038   None
Median of the strain means41.707   None 38.084   None
SD of the strain means± 4.4881 ± 4.7533
Coefficient of variation (CV)0.107 0.125
Min–max range of strain means33.571   –   50.0   None 32.75   –   47.167   None
Mean sample size per strain10.7   mice 10.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 1223.776 1223.776 17.6372 < 0.0001
strain 9 1450.784 161.1982 2.3232 0.0167
sex:strain 9 1086.6293 120.7366 1.7401 0.0823
Residuals 194 13460.901 69.3861


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
C57BL/6J f 41.071 8.7511   21 1.9097 0.2131 22.5, 58.5 -0.2
C57BL/6J m 32.75 8.1075   22 1.7285 0.2476 17.5, 51.5 -1.11
GAIA/NachJ f 41.7 5.1381   10 1.6248 0.1232 33.5, 50.0 -0.06
GAIA/NachJ m 38.167 7.6734   15 1.9813 0.201 26.0, 55.5 0.03
GAIC/NachJ f 50.0 4.4441   3 2.5658 0.0889 45.0, 53.5 1.79
GAIC/NachJ m 42.75 6.7175   2   4.75 0.1571 38.0, 47.5 0.99
MANB/NachJ f 43.864 17.264   11 5.2054 0.3936 28.0, 93.0 0.43
MANB/NachJ m 41.6 9.5563   10 3.022 0.2297 26.5, 54.5 0.75
MANE/NachJ f 41.4 8.0265   5 3.5896 0.1939 33.0, 54.5 -0.12
MANE/NachJ m 38.0 6.9732   5 3.1185 0.1835 26.5, 45.5 -0.01
MANF/NachJ f 37.413 6.5037   20 1.4543 0.1738 20.5, 45.5 -1.01
MANF/NachJ m 38.833 3.9216   12 1.1321 0.101 34.0, 45.0 0.17
SARA/NachJ f 46.5 5.73   4 2.865 0.1232 38.5, 52.0 1.01
SARA/NachJ m 34.0 6.8232   10 2.1577 0.2007 21.0, 42.0 -0.85
SARB/NachJ f 33.571 8.777   7 3.3174 0.2614 24.0, 48.0 -1.87
SARB/NachJ m 33.409 4.5045   11 1.3582 0.1348 25.5, 40.5 -0.97
SARC/NachJ f 42.316 8.5492   19 1.9613 0.202 31.0, 58.5 0.08
SARC/NachJ m 33.706 9.1584   17 2.2212 0.2717 23.5, 56.0 -0.91
TUCB/NachJ f 41.714 6.7999   7 2.5701 0.163 32.0, 50.0 -0.05
TUCB/NachJ m 47.167 5.3463   3 3.0867 0.1133 41.0, 50.5 1.92


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ 1 43.8636363636 2.5115385995 48.8170624003 38.9102103269
129S1/SvImJ 2 41.6 2.6341239057 46.795197056 36.404802944
A/J 1 41.4 3.7252137524 48.7471181359 34.0528818641
A/J 2 38.0 3.7252137524 45.3471181359 30.6528818641
BALB/cJ 1 37.4125 1.8626068762 41.0860590679 33.7389409321
BALB/cJ 2 38.8333333333 2.4046151374 43.5758776971 34.0907889695
BTBR T+ Itpr3tf/J 1 41.7 2.6341239057 46.895197056 36.504802944
BTBR T+ Itpr3tf/J 2 38.1666666667 2.1507531628 42.4085273002 33.9248060332
C3H/HeJ 1 46.5 4.1649155906 54.7143277953 38.2856722047
C3H/HeJ 2 34.0 2.6341239057 39.195197056 28.804802944
C57BL/6J 1 41.7142857143 3.1483802526 47.9237338668 35.5048375618
C57BL/6J 2 47.1666666667 4.8092302748 56.6517553943 37.6815779391
CAST/EiJ 1 50.0 4.8092302748 59.4850887276 40.5149112724
CAST/EiJ 2 42.75 5.8900801143 54.3668137738 31.1331862262
DBA/2J 1 33.5714285714 3.1483802526 39.7808767239 27.3619804189
DBA/2J 2 33.4090909091 2.5115385995 38.3625169458 28.4556648724
FVB/NJ 1 42.3157894737 1.9109943334 46.0847815525 38.5467973949
FVB/NJ 2 33.7058823529 2.020280812 37.6904166051 29.7213481008
LP/J 1 41.0714285714 1.8177181864 44.6564551338 37.4864020091
LP/J 2 32.75 1.7759259749 36.2526011407 29.2473988593


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 42.7318181818 1.8197826029 46.3209163259 39.1427200377
A/J both 39.7 2.6341239057 44.895197056 34.504802944
BALB/cJ both 38.1229166667 1.520812146 41.1223650855 35.1234682479
BTBR T+ Itpr3tf/J both 39.9333333333 1.7003196698 43.2868186131 36.5798480536
C3H/HeJ both 40.25 2.4639972924 45.1096618601 35.3903381399
C57BL/6J both 44.4404761905 2.8740648066 50.1089008951 38.7720514858
CAST/EiJ both 46.375 3.8020303651 53.873621047 38.876378953
DBA/2J both 33.4902597403 2.0137107757 37.4618361231 29.5186833574
FVB/NJ both 38.0108359133 1.3904526153 40.7531804621 35.2684913645
LP/J both 36.9107142857 1.2706309922 39.4167385376 34.4046900339




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA