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Project measure / variable:   Project1194   lightdark_latency__centroid__light__s

ID, description, units MPD:129031   lightdark_latency__centroid__light__s   lightdark_latency__centroid__light__s    
Data set, strains Project1194   other   10 strains     sex: both
Procedure None
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  STRAIN COMPARISON PLOT
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Project1194 - lightdark_latency__centroid__light__s



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested10 strains10 strains
Mean of the strain means8.586   None 14.607   None
Median of the strain means8.456   None 11.727   None
SD of the strain means± 8.1364 ± 17.966
Coefficient of variation (CV)0.9476 1.23
Min–max range of strain means0.0   –   22.654   None 0.0   –   61.56   None
Mean sample size per strain10.7   mice 10.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 1552.6169 1552.6169 2.128 0.1462
strain 9 20861.536 2317.9484 3.1769 0.0013
sex:strain 9 11671.6673 1296.8519 1.7774 0.0747
Residuals 194 141547.0881 729.6242


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
C57BL/6J f 20.188 25.812   21 5.6327 1.2786 1.43
C57BL/6J m 21.559 37.892   22 8.0785 1.7576 0.39
GAIA/NachJ f 2.687 3.699   10 1.1697 1.3766 -0.73
GAIA/NachJ m 5.8687 7.7815   15 2.0092 1.3259 -0.49
GAIC/NachJ f 0.0 0.0   3 0.0 None -1.06
GAIC/NachJ m 0.0 0.0   2   0.0 None -0.81
MANB/NachJ f 11.073 14.333   11 4.3214 1.2944 0.31
MANB/NachJ m 9.705 17.327   10 5.4792 1.7853 -0.27
MANE/NachJ f 8.294 9.0807   5 4.061 1.0949 -0.04
MANE/NachJ m 13.75 14.674   5 6.5624 1.0672 -0.05
MANF/NachJ f 8.618 12.689   20 2.8373 1.4724 0.0
MANF/NachJ m 14.914 31.165   12 8.9966 2.0896 0.02
SARA/NachJ f 0.0 0.0   4 0.0 None -1.06
SARA/NachJ m 61.56 79.74   10 25.216 1.2954 2.61
SARB/NachJ f 22.654 21.213   7 8.0179 0.9364 1.73
SARB/NachJ m 15.227 26.423   11 7.9667 1.7352 0.03
SARC/NachJ f 11.792 23.148   19 5.3105 1.9631 0.39
SARC/NachJ m 3.4824 7.2662   17 1.7623 2.0866 -0.62
TUCB/NachJ f 0.55429 1.4665   7 0.55429 2.6458 -0.99
TUCB/NachJ m 0.0 0.0   3 0.0 None -0.81


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ 1 11.0727272727 8.1442906131 27.1354472248 -4.9899926794
129S1/SvImJ 2 9.705 8.5418040571 26.5517228114 -7.1417228114
A/J 1 8.294 12.0799351446 32.1188638815 -15.5308638815
A/J 2 13.75 12.0799351446 37.5748638815 -10.0748638815
BALB/cJ 1 8.618 6.0399675723 20.5304319407 -3.2944319407
BALB/cJ 2 14.9141666667 7.7975646064 30.2930501731 -0.4647168398
BTBR T+ Itpr3tf/J 1 2.687 8.5418040571 19.5337228114 -14.1597228114
BTBR T+ Itpr3tf/J 2 5.8686666667 6.9743538075 19.623958242 -7.8866249087
C3H/HeJ 1 0.0 13.5057780736 26.6370075968 -26.6370075968
C3H/HeJ 2 61.556 8.5418040571 78.4027228114 44.7092771886
C57BL/6J 1 0.5542857143 10.2094085843 20.689970792 -19.5813993635
C57BL/6J 2 0.0 15.5951292128 30.7577670128 -30.7577670128
CAST/EiJ 1 0.0 15.5951292128 30.7577670128 -30.7577670128
CAST/EiJ 2 0.0 19.1000545221 37.6704174044 -37.6704174044
DBA/2J 1 22.6542857143 10.2094085843 42.789970792 2.5186006365
DBA/2J 2 15.2272727273 8.1442906131 31.2899926794 -0.8354472248
FVB/NJ 1 11.7915789474 6.1968759765 24.0134762392 -0.4303183445
FVB/NJ 2 3.4823529412 6.5512646534 16.4031995144 -9.438493632
LP/J 1 20.1876190476 5.8944047944 31.8129622476 8.5622758477
LP/J 2 21.5590909091 5.7588831205 32.9171491115 10.2010327067


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 10.3888636364 5.9010991802 22.0274099561 -1.2496826833
A/J both 11.022 8.5418040571 27.8687228114 -5.8247228114
BALB/cJ both 11.7660833333 4.9316128717 21.4925432835 2.0396233832
BTBR T+ Itpr3tf/J both 4.2778333333 5.5137108099 15.1523461478 -6.5966794811
C3H/HeJ both 30.778 7.9901260616 46.5366662126 15.0193337874
C57BL/6J both 0.2771428571 9.3198723007 18.6584244036 -18.1041386894
CAST/EiJ both 0.0 12.3290321793 24.3161498753 -24.3161498753
DBA/2J both 18.9407792208 6.5299596712 31.8196066694 6.0619517721
FVB/NJ both 7.6369659443 4.5088895647 16.5297024407 -1.2557705522
LP/J both 20.8733549784 4.1203380527 28.9997639431 12.7469460137




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA