Project measure / variable:   Project1194   lightdark_horizontal_activity_count__crossover__dark_

ID, description, units MPD:129024   lightdark_horizontal_activity_count__crossover__dark_   lightdark_horizontal_activity_count__crossover__dark_    
Data set, strains Project1194   other   10 strains     sex: both
Procedure None
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  STRAIN COMPARISON PLOT
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Project1194 - lightdark_horizontal_activity_count__crossover__dark_



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested10 strains10 strains
Mean of the strain means890.1   None 777.4   None
Median of the strain means821.5   None 764.6   None
SD of the strain means± 186.4 ± 101.4
Coefficient of variation (CV)0.2094 0.1304
Min–max range of strain means681.5   –   1316.0   None 650.4   –   959.5   None
Mean sample size per strain10.7   mice 10.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 278425.0514 278425.0514 14.6489 0.0002
strain 9 2413679.9017 268186.6557 14.1103 < 0.0001
sex:strain 9 335529.2222 37281.0247 1.9615 0.0457
Residuals 194 3687258.1565 19006.4853


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
C57BL/6J f 840.3 159.3   21 34.77 0.1896 571.0, 1157.0 -0.27
C57BL/6J m 750.9 95.52   22 20.365 0.1272 596.5, 924.0 -0.26
GAIA/NachJ f 796.2 163.7   10 51.77 0.2056 560.0, 1066.0 -0.5
GAIA/NachJ m 778.3 126.1   15 32.569 0.1621 481.0, 1006.0 0.01
GAIC/NachJ f 882.7 137.4   3 79.34 0.1557 794.5, 1041.0 -0.04
GAIC/NachJ m 806.0 135.1   2   95.5 0.1676 710.5, 901.5 0.28
MANB/NachJ f 762.3 184.5   11 55.64 0.2421 584.0, 1264.0 -0.69
MANB/NachJ m 685.0 146.0   10 46.181 0.2132 465.0, 877.5 -0.91
MANE/NachJ f 1069.0 103.2   5 46.146 0.0965 1002.0, 1250.0 0.96
MANE/NachJ m 894.2 113.7   5 50.85 0.1272 792.5, 1084.0 1.15
MANF/NachJ f 681.5 128.1   20 28.644 0.188 498.0, 884.0 -1.12
MANF/NachJ m 691.5 85.27   12 24.614 0.1233 564.5, 802.5 -0.85
SARA/NachJ f 1316.0 257.0   4 128.5 0.1953 989.5, 1618.0 2.29
SARA/NachJ m 959.5 187.9   10 59.41 0.1958 775.5, 1374.0 1.8
SARB/NachJ f 775.6 184.8   7 69.83 0.2382 528.0, 1106.0 -0.61
SARB/NachJ m 650.4 105.3   11 31.735 0.1618 504.5, 855.5 -1.25
SARC/NachJ f 802.7 96.5   19 22.14 0.1202 638.5, 1020.0 -0.47
SARC/NachJ m 701.3 159.3   17 38.634 0.2271 376.0, 1021.0 -0.75
TUCB/NachJ f 975.1 84.78   7 32.043 0.0869 815.0, 1058.0 0.46
TUCB/NachJ m 857.0 25.754   3 14.869 0.0301 831.0, 882.5 0.79


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ 1 762.3181818182 41.5675631216 844.3005369716 680.3358266648
129S1/SvImJ 2 684.95 43.5964279989 770.9338194787 598.9661805213
A/J 1 1068.8 61.654659747 1190.3994836514 947.2005163486
A/J 2 894.2 61.654659747 1015.7994836514 772.6005163486
BALB/cJ 1 681.55 30.8273298735 742.3497418257 620.7502581743
BALB/cJ 2 691.5416666667 39.797911736 770.0337958482 613.0495374851
BTBR T+ Itpr3tf/J 1 796.2 43.5964279989 882.1838194787 710.2161805213
BTBR T+ Itpr3tf/J 2 778.3 35.5963344017 848.5054946195 708.0945053805
C3H/HeJ 1 1315.625 68.932005162 1451.5773557367 1179.6726442633
C3H/HeJ 2 959.55 43.5964279989 1045.5338194787 873.5661805213
C57BL/6J 1 975.1428571429 52.107698009 1077.9131781236 872.3725361621
C57BL/6J 2 857.0 79.5958234721 1013.9842583631 700.0157416369
CAST/EiJ 1 882.6666666667 79.5958234721 1039.6509250298 725.6824083036
CAST/EiJ 2 806.0 97.4845765816 998.2656653194 613.7343346806
DBA/2J 1 775.5714285714 52.107698009 878.3417495522 672.8011075907
DBA/2J 2 650.3636363636 41.5675631216 732.345991517 568.3812812103
FVB/NJ 1 802.7105263158 31.6281731028 865.0897452413 740.3313073903
FVB/NJ 2 701.2941176471 33.4369339139 767.2406967946 635.3475384995
LP/J 1 840.3333333333 30.0843934724 899.6678058163 780.9988608504
LP/J 2 750.8863636364 29.3927057607 808.856642903 692.9160843698


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 723.6340909091 30.1185608808 783.0359506625 664.2322311557
A/J both 981.5 43.5964279989 1067.4838194787 895.5161805213
BALB/cJ both 686.5458333333 25.1704094408 736.1886146553 636.9030520114
BTBR T+ Itpr3tf/J both 787.25 28.1413732656 842.752316814 731.747683186
C3H/HeJ both 1137.5875 40.7807242147 1218.0179983239 1057.1570016761
C57BL/6J both 916.0714285714 47.5676026987 1009.8874669768 822.2553901661
CAST/EiJ both 844.3333333333 62.9260236021 968.4402866383 720.2263800284
DBA/2J both 712.9675324675 33.3281956295 778.6996506271 647.2354143079
FVB/NJ both 752.0023219814 23.0128761967 797.3898705356 706.6147734273
LP/J both 795.6098484848 21.0297520345 837.0861456408 754.1335513289




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA