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Project measure / variable:   Project1194   lightdark_duration__query__dark__s

ID, description, units MPD:129010   lightdark_duration__query__dark__s   lightdark_duration__query__dark__s    
Data set, strains Project1194   other   10 strains     sex: both
Procedure None
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  STRAIN COMPARISON PLOT
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Project1194 - lightdark_duration__query__dark__s



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested10 strains10 strains
Mean of the strain means165.4   None 167.0   None
Median of the strain means164.9   None 160.8   None
SD of the strain means± 18.395 ± 20.026
Coefficient of variation (CV)0.1112 0.1199
Min–max range of strain means142.4   –   201.4   None 148.3   –   217.5   None
Mean sample size per strain10.7   mice 10.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 190.2767 190.2767 0.1734 0.6775
strain 9 29371.9434 3263.5493 2.9747 0.0024
sex:strain 9 10092.8519 1121.428 1.0222 0.4236
Residuals 194 212838.151 1097.1039


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
C57BL/6J f 171.0 27.671   21 6.0384 0.1618 126.6, 228.4 0.3
C57BL/6J m 156.7 39.826   22 8.491 0.2542 98.91, 230.7 -0.51
GAIA/NachJ f 142.4 24.427   10 7.7244 0.1716 115.3, 179.9 -1.25
GAIA/NachJ m 156.4 12.426   15 3.2084 0.0795 138.2, 180.9 -0.53
GAIC/NachJ f 186.5 37.127   3 21.436 0.199 148.1, 222.2 1.15
GAIC/NachJ m 176.2 15.839   2   11.2 0.0899 165.0, 187.4 0.46
MANB/NachJ f 160.3 31.027   11 9.3549 0.1936 112.3, 220.5 -0.28
MANB/NachJ m 163.1 28.575   10 9.0362 0.1752 127.9, 225.9 -0.19
MANE/NachJ f 147.6 12.434   5 5.5604 0.0842 136.4, 166.8 -0.97
MANE/NachJ m 151.6 23.032   5 10.3 0.1519 121.7, 175.8 -0.77
MANF/NachJ f 151.0 17.744   20 3.9677 0.1175 111.8, 184.6 -0.78
MANF/NachJ m 176.0 22.473   12 6.4875 0.1277 140.7, 206.7 0.45
SARA/NachJ f 170.9 21.312   4 10.656 0.1247 140.2, 187.5 0.3
SARA/NachJ m 165.4 34.582   10 10.936 0.2091 129.4, 234.8 -0.08
SARB/NachJ f 153.3 31.712   7 11.986 0.2068 102.0, 202.3 -0.66
SARB/NachJ m 148.3 11.64   11 3.5097 0.0785 120.6, 161.0 -0.93
SARC/NachJ f 169.5 55.41   19 12.711 0.3269 115.4, 293.4 0.22
SARC/NachJ m 158.6 48.134   17 11.674 0.3034 115.8, 283.1 -0.42
TUCB/NachJ f 201.4 32.385   7 12.24 0.1608 160.9, 252.6 1.96
TUCB/NachJ m 217.5 46.287   3 26.724 0.2128 187.1, 270.8 2.52


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ 1 160.2727272727 9.9868271024 179.9694221203 140.5760324251
129S1/SvImJ 2 163.06 10.4742726301 183.7180678359 142.4019321641
A/J 1 147.62 14.8128584095 176.8349197059 118.4050802941
A/J 2 151.64 14.8128584095 180.8549197059 122.4250802941
BALB/cJ 1 150.975 7.4064292048 165.5824598529 136.3675401471
BALB/cJ 2 176.0333333333 9.5616589883 194.8914829136 157.1751837531
BTBR T+ Itpr3tf/J 1 142.37 10.4742726301 163.0280678359 121.7119321641
BTBR T+ Itpr3tf/J 2 156.3866666667 8.5522077902 173.2539084232 139.5194249101
C3H/HeJ 1 170.9 16.5612791724 203.5632732098 138.2367267902
C3H/HeJ 2 165.41 10.4742726301 186.0680678359 144.7519321641
C57BL/6J 1 201.4 12.5191503095 226.091113691 176.708886309
C57BL/6J 2 217.5333333333 19.1233179766 255.2496324939 179.8170341728
CAST/EiJ 1 186.5333333333 19.1233179766 224.2496324939 148.8170341728
CAST/EiJ 2 176.2 23.4211856159 222.3928439648 130.0071560352
DBA/2J 1 153.3142857143 12.5191503095 178.0053994053 128.6231720233
DBA/2J 2 148.2545454545 9.9868271024 167.9512403021 128.557850607
FVB/NJ 1 169.4947368421 7.5988360303 184.4816744302 154.507799254
FVB/NJ 2 158.6411764706 8.033400391 174.4851912379 142.7971617033
LP/J 1 171.0428571429 7.2279348012 185.2982782789 156.7874360068
LP/J 2 156.6913636364 7.0617531666 170.6190301301 142.7636971427


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 161.6663636364 7.236143702 175.9379749209 147.3947523518
A/J both 149.63 10.4742726301 170.2880678359 128.9719321641
BALB/cJ both 163.5041666667 6.0473241226 175.4311076926 151.5772256407
BTBR T+ Itpr3tf/J both 149.3783333333 6.76111391 162.7130587822 136.0436078845
C3H/HeJ both 168.155 9.7977848894 187.4788530286 148.8311469714
C57BL/6J both 209.4666666667 11.4283683755 232.0064665641 186.9268667692
CAST/EiJ both 181.3666666667 15.1183103065 211.1840192316 151.5493141017
DBA/2J both 150.7844155844 8.0072754425 166.576904964 134.9919262048
FVB/NJ both 164.0679566563 5.5289653385 174.9725554823 153.1633578304
LP/J both 163.8671103896 5.0525092597 173.8320103606 153.9022104186




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA