Project measure / variable:   Project1194   lightdark_ambulatory_time__query__light__s

ID, description, units MPD:128987   lightdark_ambulatory_time__query__light__s   lightdark_ambulatory_time__query__light__s    
Data set, strains Project1194   other   10 strains     sex: both
Procedure None
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  STRAIN COMPARISON PLOT
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Project1194 - lightdark_ambulatory_time__query__light__s



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested10 strains10 strains
Mean of the strain means17.21   None 16.387   None
Median of the strain means17.856   None 16.94   None
SD of the strain means± 2.6822 ± 2.4476
Coefficient of variation (CV)0.1559 0.1494
Min–max range of strain means10.714   –   20.535   None 10.518   –   18.826   None
Mean sample size per strain10.7   mice 10.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 7.8954 7.8954 0.5256 0.4693
strain 9 671.589 74.621 4.9673 < 0.0001
sex:strain 9 66.0265 7.3363 0.4884 0.8814
Residuals 194 2914.328 15.0223


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
C57BL/6J f 16.701 3.3808   21 0.73774 0.2024 10.125, 23.45 -0.19
C57BL/6J m 16.487 3.2707   22 0.69732 0.1984 8.835, 22.02 0.04
GAIA/NachJ f 18.565 2.372   10 0.75009 0.1278 14.16, 21.915 0.51
GAIA/NachJ m 17.426 3.7827   15 0.9767 0.2171 13.73, 29.445 0.42
GAIC/NachJ f 15.345 4.3609   3 2.5178 0.2842 10.355, 18.425 -0.7
GAIC/NachJ m 15.017 2.5633   2   1.8125 0.1707 13.205, 16.83 -0.56
MANB/NachJ f 17.61 3.4805   11 1.0494 0.1976 10.145, 23.26 0.15
MANB/NachJ m 17.062 4.0224   10 1.272 0.2357 8.955, 22.41 0.28
MANE/NachJ f 18.63 1.5376   5 0.68762 0.0825 16.25, 20.15 0.53
MANE/NachJ m 16.817 3.8313   5 1.7134 0.2278 13.095, 22.73 0.18
MANF/NachJ f 18.102 1.8802   20 0.42042 0.1039 13.445, 21.605 0.33
MANF/NachJ m 15.033 2.9012   12 0.83749 0.193 11.55, 21.05 -0.55
SARA/NachJ f 20.535 2.9849   4 1.4925 0.1454 16.215, 23.025 1.24
SARA/NachJ m 18.814 3.6045   10 1.1399 0.1916 11.685, 24.095 0.99
SARB/NachJ f 16.983 3.7119   7 1.403 0.2186 12.52, 22.205 -0.08
SARB/NachJ m 17.867 1.8671   11 0.56296 0.1045 15.09, 19.88 0.6
SARC/NachJ f 18.912 6.1737   19 1.4163 0.3264 5.805, 26.865 0.63
SARC/NachJ m 18.826 6.1068   17 1.4811 0.3244 2.085, 26.17 1.0
TUCB/NachJ f 10.714 3.5146   7 1.3284 0.3281 5.455, 16.755 -2.42
TUCB/NachJ m 10.518 5.1378   3 2.9663 0.4885 4.95, 15.075 -2.4


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ 1 17.6095454545 1.1686164881 19.914369812 15.3047210971
129S1/SvImJ 2 17.0625 1.2256553128 19.4798201796 14.6451798204
A/J 1 18.63 1.7333383662 22.0486069826 15.2113930174
A/J 2 16.817 1.7333383662 20.2356069826 13.3983930174
BALB/cJ 1 18.102 0.8666691831 19.8113034913 16.3926965087
BALB/cJ 2 15.0333333333 1.1188651043 17.2400346518 12.8266320149
BTBR T+ Itpr3tf/J 1 18.5645 1.2256553128 20.9818201796 16.1471798204
BTBR T+ Itpr3tf/J 2 17.4263333333 1.0007433723 19.400066995 15.4525996717
C3H/HeJ 1 20.535 1.9379312074 24.3571188007 16.7128811993
C3H/HeJ 2 18.814 1.2256553128 21.2313201796 16.3966798204
C57BL/6J 1 10.7135714286 1.4649382951 13.6028216652 7.824321192
C57BL/6J 2 10.5183333333 2.2377302085 14.9317359703 6.1049306964
CAST/EiJ 1 15.345 2.2377302085 19.7584026369 10.9315973631
CAST/EiJ 2 15.0175 2.7406485964 20.422792245 9.612207755
DBA/2J 1 16.9828571429 1.4649382951 19.8721073794 14.0936069063
DBA/2J 2 17.8672727273 1.1686164881 20.1720970848 15.5624483698
FVB/NJ 1 18.9118421053 0.8891838203 20.6655504845 17.158133726
FVB/NJ 2 18.8264705882 0.9400347133 20.6804705328 16.9724706436
LP/J 1 16.7011904762 0.845782519 18.369299878 15.0330810743
LP/J 2 16.4868181818 0.8263366433 18.1165751144 14.8570612492


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 17.3360227273 0.84674309 19.0060266322 15.6660188224
A/J both 17.7235 1.2256553128 20.1408201796 15.3061798204
BALB/cJ both 16.5676666667 0.7076324248 17.9633071231 15.1720262103
BTBR T+ Itpr3tf/J both 17.9954166667 0.7911571025 19.555790133 16.4350432003
C3H/HeJ both 19.6745 1.1464955637 21.9356959766 17.4133040234
C57BL/6J both 10.615952381 1.3372995826 13.253464929 7.9784398329
CAST/EiJ both 15.18125 1.769081062 18.670351141 11.692148859
DBA/2J both 17.4250649351 0.9369776818 19.2730355956 15.5770942746
FVB/NJ both 18.8691563467 0.6469762609 20.1451666204 17.5931460731
LP/J both 16.594004329 0.5912233752 17.7600549964 15.4279536616




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA