Project measure / variable:   Project1194   lightdark_ambulatory_episode_count__query__light_

ID, description, units MPD:128979   lightdark_ambulatory_episode_count__query__light_   lightdark_ambulatory_episode_count__query__light_    
Data set, strains Project1194   other   10 strains     sex: both
Procedure None
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  STRAIN COMPARISON PLOT
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Project1194 - lightdark_ambulatory_episode_count__query__light_



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested10 strains10 strains
Mean of the strain means1.4042   None 1.2834   None
Median of the strain means1.4906   None 1.175   None
SD of the strain means± 0.42636 ± 0.65683
Coefficient of variation (CV)0.3036 0.5118
Min–max range of strain means0.6   –   2.0   None 0.40909   –   2.7   None
Mean sample size per strain10.7   mice 10.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 1.0166 1.0166 0.8215 0.3659
strain 9 40.3022 4.478 3.6185 0.0003
sex:strain 9 16.6953 1.855 1.499 0.1505
Residuals 194 240.0785 1.2375


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
C57BL/6J f 1.1667 1.0878   21 0.23738 0.9324 -0.56
C57BL/6J m 1.0 0.69007   22 0.14712 0.6901 -0.43
GAIA/NachJ f 1.8 1.0055   10 0.31798 0.5586 1.0, 3.5 0.93
GAIA/NachJ m 2.7 2.0857   15 0.53852 0.7725 2.16
GAIC/NachJ f 2.0 0.86603   3 0.5 0.433 1.5, 3.0 1.4
GAIC/NachJ m 0.75 1.0607   2   0.75 1.4142 -0.81
MANB/NachJ f 1.6818 1.6774   11 0.50575 0.9974 0.65
MANB/NachJ m 0.75 0.677   10 0.21409 0.9027 -0.81
MANE/NachJ f 0.6 0.54772   5 0.24495 0.9129 -1.89
MANE/NachJ m 1.6 0.74162   5 0.33166 0.4635 0.5, 2.5 0.48
MANF/NachJ f 1.6875 1.2055   20 0.26955 0.7143 0.66
MANF/NachJ m 1.25 0.83937   12 0.24231 0.6715 -0.05
SARA/NachJ f 1.125 0.85391   4 0.42696 0.759 -0.65
SARA/NachJ m 1.1 0.7746   10 0.24495 0.7042 -0.28
SARB/NachJ f 1.0 0.91287   7 0.34503 0.9129 -0.95
SARB/NachJ m 0.40909 0.49082   11 0.14799 1.1998 -1.33
SARC/NachJ f 1.5526 1.1167   19 0.25619 0.7192 0.35
SARC/NachJ m 1.4412 1.1164   17 0.27076 0.7746 0.24
TUCB/NachJ f 1.4286 0.60749   7 0.22961 0.4252 0.5, 2.0 0.06
TUCB/NachJ m 1.8333 1.2583   3 0.72648 0.6863 0.5, 3.0 0.84


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ 1 1.6818181818 0.335412637 2.3433416358 1.0202947278
129S1/SvImJ 2 0.75 0.3517837415 1.4438116518 0.0561883482
A/J 1 0.6 0.4974973382 1.5811978477 -0.3811978477
A/J 2 1.6 0.4974973382 2.5811978477 0.6188021523
BALB/cJ 1 1.6875 0.2487486691 2.1780989239 1.1969010761
BALB/cJ 2 1.25 0.3211331509 1.8833604873 0.6166395127
BTBR T+ Itpr3tf/J 1 1.8 0.3517837415 2.4938116518 1.1061883482
BTBR T+ Itpr3tf/J 2 2.7 0.2872302221 3.2664948415 2.1335051585
C3H/HeJ 1 1.125 0.5562189334 2.2220125434 0.0279874566
C3H/HeJ 2 1.1 0.3517837415 1.7938116518 0.4061883482
C57BL/6J 1 1.4285714286 0.4204619921 2.2578349643 0.5993078929
C57BL/6J 2 1.8333333333 0.6422663019 3.1000543078 0.5666123588
CAST/EiJ 1 2.0 0.6422663019 3.2667209745 0.7332790255
CAST/EiJ 2 0.75 0.7866123593 2.301410017 -0.801410017
DBA/2J 1 1.0 0.4204619921 1.8292635357 0.1707364643
DBA/2J 2 0.4090909091 0.335412637 1.0706143631 -0.2524325449
FVB/NJ 1 1.5526315789 0.2552107496 2.0559754544 1.0492877035
FVB/NJ 2 1.4411764706 0.2698058134 1.9733057164 0.9090472248
LP/J 1 1.1666666667 0.2427538443 1.6454421922 0.6878911411
LP/J 2 1.0 0.2371725501 1.4677677202 0.5322322798


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 1.2159090909 0.2430295444 1.6952283708 0.736589811
A/J both 1.1 0.3517837415 1.7938116518 0.4061883482
BALB/cJ both 1.46875 0.2031024378 1.8693223439 1.0681776561
BTBR T+ Itpr3tf/J both 2.25 0.2270754287 2.6978534955 1.8021465045
C3H/HeJ both 1.1125 0.3290635587 1.761501373 0.463498627
C57BL/6J both 1.630952381 0.3838275294 2.3879629553 0.8739418066
CAST/EiJ both 1.375 0.5077560946 2.3764308598 0.3735691402
DBA/2J both 0.7045454545 0.2689283938 1.2349441941 0.174146715
FVB/NJ both 1.4969040248 0.185693096 1.8631404891 1.1306675605
LP/J both 1.0833333333 0.1696910777 1.4180095365 0.7486571301




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA