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Project measure / variable:   Project1194   clinchem_pct_baso

ID, description, units MPD:128885   clinchem_pct_baso   clinchem_pct_baso    
Data set, strains Project1194   other   10 strains     sex: both
Procedure None
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  STRAIN COMPARISON PLOT
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Project1194 - clinchem_pct_baso



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested10 strains10 strains
Mean of the strain means0.9108   None 0.84928   None
Median of the strain means0.875   None 0.6375   None
SD of the strain means± 0.40933 ± 0.49887
Coefficient of variation (CV)0.4494 0.5874
Min–max range of strain means0.37333   –   1.7   None 0.21111   –   1.85   None
Mean sample size per strain7.1   mice 6.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.0117 0.0117 0.0241 0.8768
strain 8 17.8709 2.2339 4.6059 < 0.0001
sex:strain 8 2.6176 0.3272 0.6746 0.713
Residuals 118 57.2301 0.485


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
C57BL/6J f 1.1375 0.72297   8 0.25561 0.6356 0.2, 2.0 0.55
C57BL/6J m 0.675 0.43012   8 0.15207 0.6372 0.1, 1.4 -0.35
GAIA/NachJ f 0.59 0.57048   10 0.1804 0.9669 0.2, 2.1 -0.78
GAIA/NachJ m 0.51333 0.47036   15 0.12145 0.9163 0.1, 2.0 -0.67
GAIC/NachJ f 1.1 0.70711   2   0.5 0.6428 0.6, 1.6 0.46
GAIC/NachJ m 0.6 0.0   1   0.0 0.0 0.6, 0.6 -0.5
MANB/NachJ f 1.7 0.26458   3 0.15275 0.1556 1.5, 2.0 1.93
MANB/NachJ m 1.15 0.74498   6 0.30414 0.6478 0.3, 2.1 0.6
MANE/NachJ f 1.0 0.41833   5 0.18708 0.4183 0.6, 1.5 0.22
MANE/NachJ m 1.46 0.93434   5 0.41785 0.64 0.3, 2.7 1.22
MANF/NachJ f 0.37333 0.29147   15 0.07526 0.7807 0.1, 1.1 -1.31
MANF/NachJ m 0.21111 0.06009   9 0.02003 0.2846 0.1, 0.3 -1.28
SARA/NachJ f 0.75 0.17321   4 0.0866 0.2309 0.6, 1.0 -0.39
SARA/NachJ m 0.9 1.1203   5 0.501 1.2447 0.3, 2.9 0.1
SARB/NachJ f 1.3 2.0809   3 1.2014 1.6007 0.95
SARB/NachJ m 1.85 2.4474   4 1.2237 1.3229 0.4, 5.5 2.01
SARC/NachJ f 0.58571 0.54893   14 0.14671 0.9372 0.2, 1.9 -0.79
SARC/NachJ m 0.56667 0.22697   12 0.06552 0.4005 0.2, 0.9 -0.57
TUCB/NachJ f 0.57143 0.50238   7 0.18988 0.8792 -0.83
TUCB/NachJ m 0.56667 0.30551   3 0.17638 0.5391 0.3, 0.9 -0.57


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ 1 1.0 0.3114484136 1.6167526505 0.3832473495
129S1/SvImJ 2 1.46 0.3114484136 2.0767526505 0.8432473495
A/J 1 0.3733333333 0.1798148254 0.7294156422 0.0172510245
A/J 2 0.2111111111 0.2321399414 0.6708113951 -0.2485891729
BALB/cJ 1 0.75 0.3482099122 1.439550426 0.060449574
BALB/cJ 2 0.9 0.3114484136 1.5167526505 0.2832473495
BTBR T+ Itpr3tf/J 1 0.59 0.2202272853 1.0261099815 0.1538900185
BTBR T+ Itpr3tf/J 2 0.5133333333 0.1798148254 0.8694156422 0.1572510245
C3H/HeJ 1 0.5714285714 0.2632219519 1.0926796982 0.0501774447
C3H/HeJ 2 0.5666666667 0.402078173 1.3628909148 -0.2295575814
C57BL/6J 1 1.3 0.402078173 2.0962242481 0.5037757519
C57BL/6J 2 1.85 0.3482099122 2.539550426 1.160449574
CAST/EiJ 1 1.7 0.402078173 2.4962242481 0.9037757519
CAST/EiJ 2 1.15 0.2843122027 1.7130155652 0.5869844348
DBA/2J 1 0.5857142857 0.1861260271 0.9542944921 0.2171340793
DBA/2J 2 0.5666666667 0.2010390865 0.9647787907 0.1685545426
FVB/NJ 1 1.1375 0.2462215902 1.6250857822 0.6499142178
FVB/NJ 2 0.675 0.2462215902 1.1625857822 0.1874142178


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 1.23 0.2202272853 1.6661099815 0.7938900185
A/J both 0.2922222222 0.1468181902 0.5829622099 0.0014822345
BALB/cJ both 0.825 0.2335863102 1.2875644879 0.3624355121
BTBR T+ Itpr3tf/J both 0.5516666667 0.1421561014 0.8331744493 0.2701588841
C3H/HeJ both 0.569047619 0.2402876678 1.0448826194 0.0932126187
C57BL/6J both 1.575 0.2659497134 2.1016528371 1.0483471629
CAST/EiJ both 1.425 0.2462215902 1.9125857822 0.9374142178
DBA/2J both 0.5761904762 0.1369850469 0.8474581631 0.3049227893
FVB/NJ both 0.90625 0.1741049561 1.251025213 0.561474787




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA