Project measure / variable:   Project1124   Syntrophococcus_pre

ID, description, units MPD:115068   Syntrophococcus_pre   Syntrophococcus   [%]  pre  
cocaine study
Data set, strains Project1124   CC   44 strains     sex: both
Procedure 16S rRNA Sequencing
Ontology mappings

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  STRAIN COMPARISON PLOT
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Project1124 - Syntrophococcus pre



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested38 strains35 strains
Mean of the strain means0.76682   % 0.6731   %
Median of the strain means0.45197   % 0.59105   %
SD of the strain means± 0.88666 ± 0.50334
Coefficient of variation (CV)1.1563 0.7478
Min–max range of strain means0.0   –   4.3671   % 0.0   –   2.1189   %
Mean sample size per strain1.0   mice 1.0   mice


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
CC001/UncJ f 0.54971 0.0   1   0.0 0.0 0.54971, 0.54971 -0.24
CC002/UncJ f 0.73641 0.0   1   0.0 0.0 0.73641, 0.73641 -0.03
CC002/UncJ m 0.86512 0.0   1   0.0 0.0 0.86512, 0.86512 0.38
CC003/UncJ m 0.34365 0.0   1   0.0 0.0 0.34365, 0.34365 -0.65
CC004/TauUncJ f 0.05892 0.0   1   0.0 0.0 0.05892, 0.05892 -0.8
CC005/TauUncJ f 0.3054 0.0   1   0.0 0.0 0.3054, 0.3054 -0.52
CC005/TauUncJ m 0.84386 0.0   1   0.0 0.0 0.84386, 0.84386 0.34
CC006/TauUncJ f 0.03646 0.0   1   0.0 0.0 0.03646, 0.03646 -0.82
CC006/TauUncJ m 0.36995 0.0   1   0.0 0.0 0.36995, 0.36995 -0.6
CC007/UncJ f 4.3671 0.0   1   0.0 0.0 4.3671, 4.3671 4.06
CC008/GeniUncJ f 0.14843 0.0   1   0.0 0.0 0.14843, 0.14843 -0.7
CC008/GeniUncJ m 0.573 0.0   1   0.0 0.0 0.573, 0.573 -0.2
CC009/UncJ f 0.32699 0.0   1   0.0 0.0 0.32699, 0.32699 -0.5
CC009/UncJ m 0.30397 0.0   1   0.0 0.0 0.30397, 0.30397 -0.73
CC010/GeniUncJ m 1.2535 0.0   1   0.0 0.0 1.2535, 1.2535 1.15
CC011/UncJ f 0.80233 0.0   1   0.0 0.0 0.80233, 0.80233 0.04
CC011/UncJ m 1.1297 0.0   1   0.0 0.0 1.1297, 1.1297 0.91
CC012/GeniUncJ f 0.66045 0.0   1   0.0 0.0 0.66045, 0.66045 -0.12
CC012/GeniUncJ m 0.20069 0.0   1   0.0 0.0 0.20069, 0.20069 -0.94
CC013/GeniUncJ f 1.7112 0.0   1   0.0 0.0 1.7112, 1.7112 1.07
CC013/GeniUncJ m 0.64435 0.0   1   0.0 0.0 0.64435, 0.64435 -0.06
CC016/GeniUncJ f 0.76453 0.0   1   0.0 0.0 0.76453, 0.76453 0.0
CC017/UncJ m 0.55518 0.0   1   0.0 0.0 0.55518, 0.55518 -0.23
CC018/UncJ f 0.0 0.0   1   0.0 None -0.86
CC018/UncJ m 0.0 0.0   1   0.0 None -1.34
CC019/TauUncJ m 0.74477 0.0   1   0.0 0.0 0.74477, 0.74477 0.14
CC020/GeniUncJ f 0.24151 0.0   1   0.0 0.0 0.24151, 0.24151 -0.59
CC020/GeniUncJ m 1.1656 0.0   1   0.0 0.0 1.1656, 1.1656 0.98
CC023/GeniUncJ f 1.8185 0.0   1   0.0 0.0 1.8185, 1.8185 1.19
CC023/GeniUncJ m 1.2272 0.0   1   0.0 0.0 1.2272, 1.2272 1.1
CC024/GeniUncJ m 0.75526 0.0   1   0.0 0.0 0.75526, 0.75526 0.16
CC026/GeniUncJ f 0.57663 0.0   1   0.0 0.0 0.57663, 0.57663 -0.21
CC026/GeniUncJ m 0.08682 0.0   1   0.0 0.0 0.08682, 0.08682 -1.16
CC027/GeniUncJ f 0.03014 0.0   1   0.0 0.0 0.03014, 0.03014 -0.83
CC027/GeniUncJ m 0.14761 0.0   1   0.0 0.0 0.14761, 0.14761 -1.04
CC028/GeniUncJ f 2.0257 0.0   1   0.0 0.0 2.0257, 2.0257 1.42
CC028/GeniUncJ m 1.8408 0.0   1   0.0 0.0 1.8408, 1.8408 2.32
CC029/UncJ m 0.59105 0.0   1   0.0 0.0 0.59105, 0.59105 -0.16
CC030/GeniUncJ f 0.95907 0.0   1   0.0 0.0 0.95907, 0.95907 0.22
CC030/GeniUncJ m 1.1055 0.0   1   0.0 0.0 1.1055, 1.1055 0.86
CC033/GeniUncJ f 2.5424 0.0   1   0.0 0.0 2.5424, 2.5424 2.0
CC033/GeniUncJ m 2.1189 0.0   1   0.0 0.0 2.1189, 2.1189 2.87
CC035/UncJ f 0.85303 0.0   1   0.0 0.0 0.85303, 0.85303 0.1
CC035/UncJ m 1.0235 0.0   1   0.0 0.0 1.0235, 1.0235 0.7
CC036/UncJ f 0.34436 0.0   1   0.0 0.0 0.34436, 0.34436 -0.48
CC036/UncJ m 0.07811 0.0   1   0.0 0.0 0.07811, 0.07811 -1.18
CC040/TauUncJ f 1.0441 0.0   1   0.0 0.0 1.0441, 1.0441 0.31
CC041/TauUncJ f 0.74884 0.0   1   0.0 0.0 0.74884, 0.74884 -0.02
CC043/GeniUncJ f 1.2773 0.0   1   0.0 0.0 1.2773, 1.2773 0.58
CC043/GeniUncJ m 0.46841 0.0   1   0.0 0.0 0.46841, 0.46841 -0.41
CC044/UncJ f 0.01154 0.0   1   0.0 0.0 0.01154, 0.01154 -0.85
CC044/UncJ m 0.2476 0.0   1   0.0 0.0 0.2476, 0.2476 -0.85
CC045/GeniUncJ f 0.29835 0.0   1   0.0 0.0 0.29835, 0.29835 -0.53
CC045/GeniUncJ m 0.07045 0.0   1   0.0 0.0 0.07045, 0.07045 -1.2
CC057/UncJ f 0.19195 0.0   1   0.0 0.0 0.19195, 0.19195 -0.65
CC057/UncJ m 1.0679 0.0   1   0.0 0.0 1.0679, 1.0679 0.78
CC060/UncJ f 0.35422 0.0   1   0.0 0.0 0.35422, 0.35422 -0.47
CC060/UncJ m 0.2144 0.0   1   0.0 0.0 0.2144, 0.2144 -0.91
CC065/UncJ f 0.01322 0.0   1   0.0 0.0 0.01322, 0.01322 -0.85
CC068/TauUncJ f 1.2951 0.0   1   0.0 0.0 1.2951, 1.2951 0.6
CC068/TauUncJ m 1.0812 0.0   1   0.0 0.0 1.0812, 1.0812 0.81
CC074/UncJ f 0.26353 0.0   1   0.0 0.0 0.26353, 0.26353 -0.57
CC075/UncJ f 0.32184 0.0   1   0.0 0.0 0.32184, 0.32184 -0.5
CC075/UncJ m 0.5554 0.0   1   0.0 0.0 0.5554, 0.5554 -0.23
CC078/TauUncJ f 0.24561 0.0   1   0.0 0.0 0.24561, 0.24561 -0.59
CC078/TauUncJ m 0.26285 0.0   1   0.0 0.0 0.26285, 0.26285 -0.82
CC079/TauUncJ f 0.06829 0.0   1   0.0 0.0 0.06829, 0.06829 -0.79
CC079/TauUncJ m 0.88307 0.0   1   0.0 0.0 0.88307, 0.88307 0.42
CC080/TauUncJ f 0.21629 0.0   1   0.0 0.0 0.21629, 0.21629 -0.62
CC080/TauUncJ m 0.62442 0.0   1   0.0 0.0 0.62442, 0.62442 -0.1
CC083/UncJ f 0.80269 0.0   1   0.0 0.0 0.80269, 0.80269 0.04
CC083/UncJ m 0.11478 0.0   1   0.0 0.0 0.11478, 0.11478 -1.11
CC084/TauJ f 2.1272 0.0   1   0.0 0.0 2.1272, 2.1272 1.53




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA