Project measure / variable:   Project1124   Syntrophococcus_pos

ID, description, units MPD:115067   Syntrophococcus_pos   Syntrophococcus   [%]  pos  
cocaine study
Data set, strains Project1124   CC   38 strains     sex: both
Procedure 16S rRNA Sequencing
Ontology mappings

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  STRAIN COMPARISON PLOT
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Project1124 - Syntrophococcus pos



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested34 strains33 strains
Mean of the strain means0.6003   % 0.62505   %
Median of the strain means0.4745   % 0.40554   %
SD of the strain means± 0.45911 ± 0.67599
Coefficient of variation (CV)0.7648 1.0815
Min–max range of strain means0.02848   –   1.6239   % 0.01138   –   3.0459   %
Mean sample size per strain1.0   mice 1.0   mice


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
CC001/UncJ f 0.36615 0.0   1   0.0 0.0 0.36615, 0.36615 -0.51
CC001/UncJ m 0.06844 0.0   1   0.0 0.0 0.06844, 0.06844 -0.82
CC002/UncJ f 1.548 0.0   1   0.0 0.0 1.548, 1.548 2.06
CC002/UncJ m 0.43046 0.0   1   0.0 0.0 0.43046, 0.43046 -0.29
CC003/UncJ f 1.3803 0.0   1   0.0 0.0 1.3803, 1.3803 1.7
CC003/UncJ m 0.23907 0.0   1   0.0 0.0 0.23907, 0.23907 -0.57
CC004/TauUncJ f 0.75682 0.0   1   0.0 0.0 0.75682, 0.75682 0.34
CC005/TauUncJ f 0.02848 0.0   1   0.0 0.0 0.02848, 0.02848 -1.25
CC005/TauUncJ m 0.08224 0.0   1   0.0 0.0 0.08224, 0.08224 -0.8
CC007/UncJ m 1.8991 0.0   1   0.0 0.0 1.8991, 1.8991 1.88
CC008/GeniUncJ f 0.29547 0.0   1   0.0 0.0 0.29547, 0.29547 -0.66
CC008/GeniUncJ m 0.27109 0.0   1   0.0 0.0 0.27109, 0.27109 -0.52
CC009/UncJ f 0.77971 0.0   1   0.0 0.0 0.77971, 0.77971 0.39
CC009/UncJ m 0.11081 0.0   1   0.0 0.0 0.11081, 0.11081 -0.76
CC010/GeniUncJ m 0.72574 0.0   1   0.0 0.0 0.72574, 0.72574 0.15
CC011/UncJ f 1.6239 0.0   1   0.0 0.0 1.6239, 1.6239 2.23
CC011/UncJ m 1.9516 0.0   1   0.0 0.0 1.9516, 1.9516 1.96
CC012/GeniUncJ f 1.429 0.0   1   0.0 0.0 1.429, 1.429 1.81
CC012/GeniUncJ m 0.47007 0.0   1   0.0 0.0 0.47007, 0.47007 -0.23
CC013/GeniUncJ f 1.0779 0.0   1   0.0 0.0 1.0779, 1.0779 1.04
CC013/GeniUncJ m 0.39253 0.0   1   0.0 0.0 0.39253, 0.39253 -0.34
CC016/GeniUncJ f 0.29279 0.0   1   0.0 0.0 0.29279, 0.29279 -0.67
CC017/UncJ f 0.19011 0.0   1   0.0 0.0 0.19011, 0.19011 -0.89
CC017/UncJ m 0.70386 0.0   1   0.0 0.0 0.70386, 0.70386 0.12
CC018/UncJ f 0.23533 0.0   1   0.0 0.0 0.23533, 0.23533 -0.79
CC018/UncJ m 0.27386 0.0   1   0.0 0.0 0.27386, 0.27386 -0.52
CC019/TauUncJ m 0.21778 0.0   1   0.0 0.0 0.21778, 0.21778 -0.6
CC020/GeniUncJ f 0.21425 0.0   1   0.0 0.0 0.21425, 0.21425 -0.84
CC020/GeniUncJ m 0.62162 0.0   1   0.0 0.0 0.62162, 0.62162 -0.01
CC023/GeniUncJ f 0.68021 0.0   1   0.0 0.0 0.68021, 0.68021 0.17
CC023/GeniUncJ m 0.51788 0.0   1   0.0 0.0 0.51788, 0.51788 -0.16
CC026/GeniUncJ f 0.70778 0.0   1   0.0 0.0 0.70778, 0.70778 0.23
CC026/GeniUncJ m 0.46745 0.0   1   0.0 0.0 0.46745, 0.46745 -0.23
CC027/GeniUncJ f 0.39648 0.0   1   0.0 0.0 0.39648, 0.39648 -0.44
CC027/GeniUncJ m 3.0459 0.0   1   0.0 0.0 3.0459, 3.0459 3.58
CC028/GeniUncJ f 1.0877 0.0   1   0.0 0.0 1.0877, 1.0877 1.06
CC028/GeniUncJ m 0.01138 0.0   1   0.0 0.0 0.01138, 0.01138 -0.91
CC029/UncJ m 0.40554 0.0   1   0.0 0.0 0.40554, 0.40554 -0.32
CC030/GeniUncJ f 0.56934 0.0   1   0.0 0.0 0.56934, 0.56934 -0.07
CC030/GeniUncJ m 1.209 0.0   1   0.0 0.0 1.209, 1.209 0.86
CC033/GeniUncJ f 0.18294 0.0   1   0.0 0.0 0.18294, 0.18294 -0.91
CC033/GeniUncJ m 0.37114 0.0   1   0.0 0.0 0.37114, 0.37114 -0.38
CC035/UncJ f 0.28805 0.0   1   0.0 0.0 0.28805, 0.28805 -0.68
CC035/UncJ m 0.1784 0.0   1   0.0 0.0 0.1784, 0.1784 -0.66
CC036/UncJ f 0.2142 0.0   1   0.0 0.0 0.2142, 0.2142 -0.84
CC036/UncJ m 0.09502 0.0   1   0.0 0.0 0.09502, 0.09502 -0.78
CC040/TauUncJ f 1.263 0.0   1   0.0 0.0 1.263, 1.263 1.44
CC041/TauUncJ f 0.37265 0.0   1   0.0 0.0 0.37265, 0.37265 -0.5
CC044/UncJ f 0.2408 0.0   1   0.0 0.0 0.2408, 0.2408 -0.78
CC044/UncJ m 0.67883 0.0   1   0.0 0.0 0.67883, 0.67883 0.08
CC045/GeniUncJ f 0.51697 0.0   1   0.0 0.0 0.51697, 0.51697 -0.18
CC045/GeniUncJ m 0.24646 0.0   1   0.0 0.0 0.24646, 0.24646 -0.56
CC057/UncJ f 0.06164 0.0   1   0.0 0.0 0.06164, 0.06164 -1.17
CC057/UncJ m 0.44709 0.0   1   0.0 0.0 0.44709, 0.44709 -0.26
CC068/TauUncJ f 0.93359 0.0   1   0.0 0.0 0.93359, 0.93359 0.73
CC068/TauUncJ m 1.0565 0.0   1   0.0 0.0 1.0565, 1.0565 0.64
CC074/UncJ f 0.43203 0.0   1   0.0 0.0 0.43203, 0.43203 -0.37
CC075/UncJ f 0.63524 0.0   1   0.0 0.0 0.63524, 0.63524 0.08
CC075/UncJ m 0.20989 0.0   1   0.0 0.0 0.20989, 0.20989 -0.61
CC079/TauUncJ f 0.0797 0.0   1   0.0 0.0 0.0797, 0.0797 -1.13
CC079/TauUncJ m 1.4425 0.0   1   0.0 0.0 1.4425, 1.4425 1.21
CC080/TauUncJ f 0.90694 0.0   1   0.0 0.0 0.90694, 0.90694 0.67
CC080/TauUncJ m 1.5087 0.0   1   0.0 0.0 1.5087, 1.5087 1.31
CC083/UncJ f 0.53658 0.0   1   0.0 0.0 0.53658, 0.53658 -0.14
CC083/UncJ m 0.07382 0.0   1   0.0 0.0 0.07382, 0.07382 -0.82
CC084/TauJ f 0.08609 0.0   1   0.0 0.0 0.08609, 0.08609 -1.12
CC084/TauJ m 0.20295 0.0   1   0.0 0.0 0.20295, 0.20295 -0.62




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA