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Project measure / variable:   Project1124   Lactobacillus_pos

ID, description, units MPD:115029   Lactobacillus_pos   Lactobacillus   [%]  pos  
cocaine study
Data set, strains Project1124   CC   38 strains     sex: both
Procedure 16S rRNA Sequencing
Ontology mappings

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  STRAIN COMPARISON PLOT
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Project1124 - Lactobacillus pos



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested34 strains33 strains
Mean of the strain means6.723   % 5.3093   %
Median of the strain means4.8299   % 1.5981   %
SD of the strain means± 7.3038 ± 9.8327
Coefficient of variation (CV)1.0864 1.852
Min–max range of strain means0.0   –   28.977   % 0.0   –   51.46   %
Mean sample size per strain1.0   mice 1.0   mice


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
CC001/UncJ f 0.7323 0.0   1   0.0 0.0 0.7323, 0.7323 -0.82
CC001/UncJ m 0.25666 0.0   1   0.0 0.0 0.25666, 0.25666 -0.51
CC002/UncJ f 1.2002 0.0   1   0.0 0.0 1.2002, 1.2002 -0.76
CC002/UncJ m 2.2644 0.0   1   0.0 0.0 2.2644, 2.2644 -0.31
CC003/UncJ f 5.2776 0.0   1   0.0 0.0 5.2776, 5.2776 -0.2
CC003/UncJ m 51.46 0.0   1   0.0 0.0 51.46, 51.46 4.69
CC004/TauUncJ f 8.4573 0.0   1   0.0 0.0 8.4573, 8.4573 0.24
CC005/TauUncJ f 13.617 0.0   1   0.0 0.0 13.617, 13.617 0.94
CC005/TauUncJ m 0.13315 0.0   1   0.0 0.0 0.13315, 0.13315 -0.53
CC007/UncJ m 16.16 0.0   1   0.0 0.0 16.16, 16.16 1.1
CC008/GeniUncJ f 0.72882 0.0   1   0.0 0.0 0.72882, 0.72882 -0.82
CC008/GeniUncJ m 5.7342 0.0   1   0.0 0.0 5.7342, 5.7342 0.04
CC009/UncJ f 10.329 0.0   1   0.0 0.0 10.329, 10.329 0.49
CC009/UncJ m 0.00527649 0.0   1   0.0 0.0 0.00527649, 0.00527649 -0.54
CC010/GeniUncJ m 14.612 0.0   1   0.0 0.0 14.612, 14.612 0.95
CC011/UncJ f 0.83288 0.0   1   0.0 0.0 0.83288, 0.83288 -0.81
CC011/UncJ m 0.16818 0.0   1   0.0 0.0 0.16818, 0.16818 -0.52
CC012/GeniUncJ f 24.904 0.0   1   0.0 0.0 24.904, 24.904 2.49
CC012/GeniUncJ m 3.3145 0.0   1   0.0 0.0 3.3145, 3.3145 -0.2
CC013/GeniUncJ f 0.27583 0.0   1   0.0 0.0 0.27583, 0.27583 -0.88
CC013/GeniUncJ m 1.4524 0.0   1   0.0 0.0 1.4524, 1.4524 -0.39
CC016/GeniUncJ f 18.812 0.0   1   0.0 0.0 18.812, 18.812 1.66
CC017/UncJ f 3.8306 0.0   1   0.0 0.0 3.8306, 3.8306 -0.4
CC017/UncJ m 0.10102 0.0   1   0.0 0.0 0.10102, 0.10102 -0.53
CC018/UncJ f 2.9231 0.0   1   0.0 0.0 2.9231, 2.9231 -0.52
CC018/UncJ m 0.00396904 0.0   1   0.0 0.0 0.00396904, 0.00396904 -0.54
CC019/TauUncJ m 2.0235 0.0   1   0.0 0.0 2.0235, 2.0235 -0.33
CC020/GeniUncJ f 5.8188 0.0   1   0.0 0.0 5.8188, 5.8188 -0.12
CC020/GeniUncJ m 4.66 0.0   1   0.0 0.0 4.66, 4.66 -0.07
CC023/GeniUncJ f 10.977 0.0   1   0.0 0.0 10.977, 10.977 0.58
CC023/GeniUncJ m 0.03946 0.0   1   0.0 0.0 0.03946, 0.03946 -0.54
CC026/GeniUncJ f 6.6206 0.0   1   0.0 0.0 6.6206, 6.6206 -0.01
CC026/GeniUncJ m 3.6871 0.0   1   0.0 0.0 3.6871, 3.6871 -0.16
CC027/GeniUncJ f 11.175 0.0   1   0.0 0.0 11.175, 11.175 0.61
CC027/GeniUncJ m 1.0443 0.0   1   0.0 0.0 1.0443, 1.0443 -0.43
CC028/GeniUncJ f 2.291 0.0   1   0.0 0.0 2.291, 2.291 -0.61
CC028/GeniUncJ m 0.12518 0.0   1   0.0 0.0 0.12518, 0.12518 -0.53
CC029/UncJ m 12.007 0.0   1   0.0 0.0 12.007, 12.007 0.68
CC030/GeniUncJ f 0.0 0.0   1   0.0 None -0.92
CC030/GeniUncJ m 0.00227262 0.0   1   0.0 0.0 0.00227262, 0.00227262 -0.54
CC033/GeniUncJ f 2.1952 0.0   1   0.0 0.0 2.1952, 2.1952 -0.62
CC033/GeniUncJ m 4.1419 0.0   1   0.0 0.0 4.1419, 4.1419 -0.12
CC035/UncJ f 8.5925 0.0   1   0.0 0.0 8.5925, 8.5925 0.26
CC035/UncJ m 0.00540599 0.0   1   0.0 0.0 0.00540599, 0.00540599 -0.54
CC036/UncJ f 0.89966 0.0   1   0.0 0.0 0.89966, 0.89966 -0.8
CC036/UncJ m 2.5691 0.0   1   0.0 0.0 2.5691, 2.5691 -0.28
CC040/TauUncJ f 7.7978 0.0   1   0.0 0.0 7.7978, 7.7978 0.15
CC041/TauUncJ f 0.30275 0.0   1   0.0 0.0 0.30275, 0.30275 -0.88
CC044/UncJ f 0.0 0.0   1   0.0 None -0.92
CC044/UncJ m 0.0 0.0   1   0.0 None -0.54
CC045/GeniUncJ f 12.229 0.0   1   0.0 0.0 12.229, 12.229 0.75
CC045/GeniUncJ m 19.869 0.0   1   0.0 0.0 19.869, 19.869 1.48
CC057/UncJ f 0.10016 0.0   1   0.0 0.0 0.10016, 0.10016 -0.91
CC057/UncJ m 1.5981 0.0   1   0.0 0.0 1.5981, 1.5981 -0.38
CC068/TauUncJ f 7.3629 0.0   1   0.0 0.0 7.3629, 7.3629 0.09
CC068/TauUncJ m 6.9312 0.0   1   0.0 0.0 6.9312, 6.9312 0.16
CC074/UncJ f 10.306 0.0   1   0.0 0.0 10.306, 10.306 0.49
CC075/UncJ f 4.3822 0.0   1   0.0 0.0 4.3822, 4.3822 -0.32
CC075/UncJ m 1.4311 0.0   1   0.0 0.0 1.4311, 1.4311 -0.39
CC079/TauUncJ f 16.356 0.0   1   0.0 0.0 16.356, 16.356 1.32
CC079/TauUncJ m 12.628 0.0   1   0.0 0.0 12.628, 12.628 0.74
CC080/TauUncJ f 0.08245 0.0   1   0.0 0.0 0.08245, 0.08245 -0.91
CC080/TauUncJ m 0.69383 0.0   1   0.0 0.0 0.69383, 0.69383 -0.47
CC083/UncJ f 0.19597 0.0   1   0.0 0.0 0.19597, 0.19597 -0.89
CC083/UncJ m 5.8465 0.0   1   0.0 0.0 5.8465, 5.8465 0.05
CC084/TauJ f 28.977 0.0   1   0.0 0.0 28.977, 28.977 3.05
CC084/TauJ m 0.23896 0.0   1   0.0 0.0 0.23896, 0.23896 -0.52




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA