Phenotype measure:   Everett1   post_area


  STRAIN COMPARISON PLOT
Dimensions Width:   px    Height:   px
Download Plot   
Visualization Options

Everett1 - mandible, posterior area



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested14 strains13 strains
Mean of the strain means13.3   mm2 13.5   mm2
Median of the strain means13.0   mm2 13.4   mm2
SD of the strain means± 1.29 ± 1.50
Coefficient of variation (CV)0.0967 0.112
Min–max range of strain means10.8   –   15.0   mm2 10.7   –   15.3   mm2
Mean sample size per strain10.0   mice 10.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.6195 0.6195 1.57 0.2115
strain 12 471.9766 39.3314 99.6869 < 0.0001
sex:strain 12 10.4052 0.8671 2.1977 0.0126
Residuals 233 91.9299 0.3945


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 14.9 0.575   10 0.182 0.0385 14.2, 15.9 1.25
129S1/SvImJ m 14.6 0.672   10 0.213 0.0462 13.7, 15.4 0.76
A/J f 12.2 0.527   10 0.167 0.0431 11.2, 13.0 -0.85
A/J m 12.3 0.642   10 0.203 0.0523 11.2, 13.3 -0.77
BALB/cByJ f 15.0 0.627   10 0.198 0.0418 14.0, 15.7 1.33
BALB/cByJ m 14.9 0.514   9 0.171 0.0345 14.2, 15.8 0.96
C3H/HeJ f 14.4 0.773   10 0.244 0.0537 13.0, 15.9 0.86
C3H/HeJ m 15.3 0.608   10 0.192 0.0398 14.6, 16.4 1.23
C57BL/10J f 14.9 0.83   10 0.262 0.0555 13.2, 16.1 1.25
C57BL/10J m 15.3 1.1   10 0.347 0.072 13.6, 16.8 1.23
C57BL/6J f 14.4 0.696   10 0.22 0.0485 13.1, 15.1 0.86
C57BL/6J m 14.8 0.754   10 0.238 0.051 13.9, 16.0 0.89
CAST/EiJ f 10.8 0.476   10 0.15 0.0442 10.0, 11.5 -1.94
CAST/EiJ m 10.7 0.495   10 0.157 0.0463 9.77, 11.4 -1.83
CBA/J f 12.9 0.703   10 0.222 0.0547 11.1, 13.6 -0.31
CBA/J m 13.4 0.744   10 0.235 0.0555 12.4, 14.4 -0.04
DBA/2J f 13.1 0.434   10 0.137 0.0331 12.2, 13.6 -0.15
DBA/2J m 13.0 0.537   10 0.17 0.0412 12.2, 13.7 -0.3
FVB/NJ f 12.6 0.389   10 0.123 0.031 12.0, 13.2 -0.54
FVB/NJ m 12.8 0.516   10 0.163 0.0402 12.2, 13.6 -0.43
MOLF/EiJ f 12.0 0.477   10 0.151 0.0396 11.0, 12.6 -1.01
MOLF/EiJ m 11.3 0.42   10 0.133 0.0373 10.2, 11.8 -1.43
PERA/EiJ f 12.4 0.622   10 0.197 0.05 11.2, 13.2 -0.69
PERA/EiJ m 12.6 0.286   10 0.0904 0.0227 12.2, 13.2 -0.57
SJL/J f 13.7 0.809   10 0.256 0.0589 13.0, 15.7 0.32
SJL/J m 13.9 0.507   10 0.16 0.0365 12.7, 14.4 0.3
SPRET/EiJ f 12.8 0.877   8 0.31 0.0683 11.3, 13.8 -0.38


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 14.92 0.1986 15.3113 14.5287
129S1/SvImJ m 14.555 0.1986 14.9463 14.1637
A/J f 12.22 0.1986 12.6113 11.8287
A/J m 12.265 0.1986 12.6563 11.8737
BALB/cByJ f 15.005 0.1986 15.3963 14.6137
BALB/cByJ m 14.8944 0.2094 15.307 14.4819
C3H/HeJ f 14.4 0.1986 14.7913 14.0087
C3H/HeJ m 15.285 0.1986 15.6763 14.8937
C57BL/10J f 14.945 0.1986 15.3363 14.5537
C57BL/10J m 15.26 0.1986 15.6513 14.8687
C57BL/6J f 14.36 0.1986 14.7513 13.9687
C57BL/6J m 14.775 0.1986 15.1663 14.3837
CAST/EiJ f 10.765 0.1986 11.1563 10.3737
CAST/EiJ m 10.7085 0.1986 11.0998 10.3172
CBA/J f 12.855 0.1986 13.2463 12.4637
CBA/J m 13.41 0.1986 13.8013 13.0187
DBA/2J f 13.09 0.1986 13.4813 12.6987
DBA/2J m 13.035 0.1986 13.4263 12.6437
FVB/NJ f 12.555 0.1986 12.9463 12.1637
FVB/NJ m 12.84 0.1986 13.2313 12.4487
MOLF/EiJ f 12.03 0.1986 12.4213 11.6387
MOLF/EiJ m 11.255 0.1986 11.6463 10.8637
PERA/EiJ f 12.445 0.1986 12.8363 12.0537
PERA/EiJ m 12.565 0.1986 12.9563 12.1737
SJL/J f 13.735 0.1986 14.1263 13.3437
SJL/J m 13.895 0.1986 14.2863 13.5037


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 14.7375 0.1405 15.0142 14.4608
A/J both 12.2425 0.1405 12.5192 11.9658
BALB/cByJ both 14.9497 0.1443 15.234 14.6654
C3H/HeJ both 14.8425 0.1405 15.1192 14.5658
C57BL/10J both 15.1025 0.1405 15.3792 14.8258
C57BL/6J both 14.5675 0.1405 14.8442 14.2908
CAST/EiJ both 10.7368 0.1405 11.0135 10.46
CBA/J both 13.1325 0.1405 13.4092 12.8558
DBA/2J both 13.0625 0.1405 13.3392 12.7858
FVB/NJ both 12.6975 0.1405 12.9742 12.4208
MOLF/EiJ both 11.6425 0.1405 11.9192 11.3658
PERA/EiJ both 12.505 0.1405 12.7817 12.2283
SJL/J both 13.815 0.1405 14.0917 13.5383




  GWAS USING LINEAR MIXED MODELS