Phenotype measure:   Everett1   ant_area


  STRAIN COMPARISON PLOT
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Everett1 - mandible, anterior area



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested14 strains13 strains
Mean of the strain means13.1   mm2 13.5   mm2
Median of the strain means13.2   mm2 13.8   mm2
SD of the strain means± 1.36 ± 1.51
Coefficient of variation (CV)0.103 0.112
Min–max range of strain means9.95   –   14.9   mm2 10.4   –   15.4   mm2
Mean sample size per strain10.0   mice 9.9   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 7.877 7.877 28.5698 < 0.0001
strain 12 509.6919 42.4743 154.0533 < 0.0001
sex:strain 12 2.3038 0.192 0.6963 0.7544
Residuals 231 63.6894 0.2757


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 14.9 0.672   10 0.212 0.045 13.9, 15.9 1.31
129S1/SvImJ m 15.4 0.373   10 0.118 0.0242 14.9, 16.2 1.25
A/J f 12.8 0.498   10 0.157 0.0388 12.2, 13.7 -0.23
A/J m 13.2 0.785   9 0.262 0.0595 11.8, 14.2 -0.2
BALB/cByJ f 13.5 0.471   10 0.149 0.0348 12.4, 14.1 0.28
BALB/cByJ m 13.8 0.404   10 0.128 0.0294 13.3, 14.8 0.19
C3H/HeJ f 14.5 0.74   10 0.234 0.0511 13.1, 16.0 1.02
C3H/HeJ m 14.9 0.526   10 0.166 0.0353 14.2, 16.2 0.92
C57BL/10J f 14.6 0.673   10 0.213 0.0461 13.4, 15.4 1.09
C57BL/10J m 15.1 0.629   8 0.222 0.0418 14.2, 16.1 1.05
C57BL/6J f 14.2 0.715   10 0.226 0.0504 13.2, 15.3 0.8
C57BL/6J m 15.0 0.323   10 0.102 0.0215 14.4, 15.6 0.99
CAST/EiJ f 9.95 0.661   10 0.209 0.0665 8.72, 11.2 -2.33
CAST/EiJ m 10.4 0.476   10 0.15 0.0459 9.51, 11.3 -2.05
CBA/J f 13.9 0.501   10 0.158 0.0361 12.6, 14.3 0.58
CBA/J m 14.3 0.81   10 0.256 0.0565 12.5, 15.2 0.52
DBA/2J f 12.8 0.629   10 0.199 0.0491 11.7, 13.8 -0.23
DBA/2J m 13.0 0.456   10 0.144 0.035 12.4, 13.6 -0.34
FVB/NJ f 13.3 0.243   10 0.0768 0.0182 13.0, 13.8 0.13
FVB/NJ m 13.8 0.328   10 0.104 0.0238 13.3, 14.2 0.19
MOLF/EiJ f 11.3 0.269   10 0.085 0.0238 10.6, 11.5 -1.34
MOLF/EiJ m 11.3 0.319   10 0.101 0.0283 10.8, 11.9 -1.46
PERA/EiJ f 12.8 0.416   10 0.132 0.0326 12.2, 13.6 -0.23
PERA/EiJ m 13.0 0.333   10 0.105 0.0256 12.4, 13.4 -0.34
SJL/J f 12.1 0.455   10 0.144 0.0377 11.6, 12.8 -0.75
SJL/J m 12.4 0.312   10 0.0986 0.0251 11.9, 12.9 -0.73
SPRET/EiJ f 13.0 0.427   8 0.151 0.0328 12.4, 13.5 -0.09


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 14.93 0.166 15.2572 14.6028
129S1/SvImJ m 15.41 0.166 15.7372 15.0828
A/J f 12.825 0.166 13.1522 12.4978
A/J m 13.1889 0.175 13.5337 12.844
BALB/cByJ f 13.525 0.166 13.8522 13.1978
BALB/cByJ m 13.755 0.166 14.0822 13.4278
C3H/HeJ f 14.475 0.166 14.8022 14.1478
C3H/HeJ m 14.885 0.166 15.2122 14.5578
C57BL/10J f 14.605 0.166 14.9322 14.2778
C57BL/10J m 15.0625 0.1856 15.4283 14.6967
C57BL/6J f 14.205 0.166 14.5322 13.8778
C57BL/6J m 15.025 0.166 15.3522 14.6978
CAST/EiJ f 9.945 0.166 10.2722 9.6178
CAST/EiJ m 10.363 0.166 10.6902 10.0358
CBA/J f 13.885 0.166 14.2122 13.5578
CBA/J m 14.34 0.166 14.6672 14.0128
DBA/2J f 12.82 0.166 13.1472 12.4928
DBA/2J m 13.045 0.166 13.3722 12.7178
FVB/NJ f 13.335 0.166 13.6622 13.0078
FVB/NJ m 13.755 0.166 14.0822 13.4278
MOLF/EiJ f 11.32 0.166 11.6472 10.9928
MOLF/EiJ m 11.28 0.166 11.6072 10.9528
PERA/EiJ f 12.77 0.166 13.0972 12.4428
PERA/EiJ m 13.01 0.166 13.3372 12.6828
SJL/J f 12.055 0.166 12.3822 11.7278
SJL/J m 12.415 0.166 12.7422 12.0878


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 15.17 0.1174 15.4013 14.9387
A/J both 13.0069 0.1206 13.2446 12.7693
BALB/cByJ both 13.64 0.1174 13.8713 13.4087
C3H/HeJ both 14.68 0.1174 14.9113 14.4487
C57BL/10J both 14.8337 0.1245 15.0791 14.5884
C57BL/6J both 14.615 0.1174 14.8463 14.3837
CAST/EiJ both 10.154 0.1174 10.3853 9.9227
CBA/J both 14.1125 0.1174 14.3438 13.8812
DBA/2J both 12.9325 0.1174 13.1638 12.7012
FVB/NJ both 13.545 0.1174 13.7763 13.3137
MOLF/EiJ both 11.3 0.1174 11.5313 11.0687
PERA/EiJ both 12.89 0.1174 13.1213 12.6587
SJL/J both 12.235 0.1174 12.4663 12.0037




  GWAS USING LINEAR MIXED MODELS