Phenotype measure:   Everett1   molar_arch

ID, description, units MPD:11011   molar_arch   mandible, anterior molar to posterior molar   [mm]
Data set, strains Everett1   inbred   14 strains     sex: both     age: 8-9wks
Procedure bone dimensions
Ontology mappings

  STRAIN COMPARISON PLOT
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Everett1 - mandible, anterior molar to posterior molar



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested14 strains13 strains
Mean of the strain means2.17   mm 2.18   mm
Median of the strain means2.17   mm 2.17   mm
SD of the strain means± 0.132 ± 0.130
Coefficient of variation (CV)0.0608 0.0596
Min–max range of strain means1.91   –   2.35   mm 1.98   –   2.38   mm
Mean sample size per strain10.0   mice 10.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.014 0.014 2.3596 0.1259
strain 12 4.2364 0.353 59.3694 < 0.0001
sex:strain 12 0.0732 0.0061 1.0252 0.4263
Residuals 234 1.3915 0.0059


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 2.19 0.0851   10 0.0269 0.0389 2.06, 2.31 0.18
129S1/SvImJ m 2.24 0.0327   10 0.0103 0.0146 2.19, 2.3 0.44
A/J f 2.12 0.0784   10 0.0248 0.037 1.94, 2.19 -0.35
A/J m 2.12 0.0674   10 0.0213 0.0317 2.02, 2.25 -0.48
BALB/cByJ f 2.32 0.0587   10 0.0186 0.0254 2.18, 2.39 1.17
BALB/cByJ m 2.3 0.0428   10 0.0135 0.0186 2.21, 2.36 0.9
C3H/HeJ f 2.09 0.0649   10 0.0205 0.031 2.0, 2.2 -0.58
C3H/HeJ m 2.07 0.03   10 0.00949 0.0145 2.04, 2.12 -0.87
C57BL/10J f 2.35 0.07   10 0.0221 0.0298 2.23, 2.42 1.39
C57BL/10J m 2.38 0.0389   10 0.0123 0.0163 2.32, 2.44 1.51
C57BL/6J f 2.29 0.0837   10 0.0265 0.0365 2.22, 2.52 0.94
C57BL/6J m 2.28 0.0565   10 0.0179 0.0248 2.19, 2.37 0.75
CAST/EiJ f 1.91 0.204   10 0.0644 0.107 1.48, 2.08 -1.95
CAST/EiJ m 1.98 0.121   10 0.0384 0.0611 1.75, 2.12 -1.56
CBA/J f 2.15 0.0455   10 0.0144 0.0212 2.09, 2.25 -0.12
CBA/J m 2.14 0.0912   10 0.0288 0.0427 1.93, 2.24 -0.33
DBA/2J f 2.18 0.0901   10 0.0285 0.0414 2.02, 2.34 0.1
DBA/2J m 2.17 0.0699   10 0.0221 0.0323 2.06, 2.27 -0.1
FVB/NJ f 2.32 0.0615   10 0.0194 0.0265 2.23, 2.44 1.17
FVB/NJ m 2.35 0.0633   10 0.02 0.027 2.23, 2.48 1.28
MOLF/EiJ f 2.0 0.0561   10 0.0177 0.028 1.91, 2.08 -1.26
MOLF/EiJ m 1.99 0.0803   10 0.0254 0.0404 1.83, 2.1 -1.48
PERA/EiJ f 2.25 0.0438   10 0.0138 0.0195 2.17, 2.33 0.63
PERA/EiJ m 2.26 0.073   10 0.0231 0.0322 2.15, 2.38 0.59
SJL/J f 2.03 0.0373   10 0.0118 0.0184 1.97, 2.08 -1.04
SJL/J m 2.1 0.055   10 0.0174 0.0262 1.99, 2.19 -0.64
SPRET/EiJ f 2.13 0.0534   8 0.0189 0.0251 2.04, 2.21 -0.28


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 2.19 0.0244 2.238 2.142
129S1/SvImJ m 2.2445 0.0244 2.2925 2.1965
A/J f 2.119 0.0244 2.167 2.071
A/J m 2.1245 0.0244 2.1725 2.0765
BALB/cByJ f 2.316 0.0244 2.364 2.268
BALB/cByJ m 2.2995 0.0244 2.3475 2.2515
C3H/HeJ f 2.095 0.0244 2.143 2.047
C3H/HeJ m 2.0735 0.0244 2.1215 2.0255
C57BL/10J f 2.3515 0.0244 2.3995 2.3035
C57BL/10J m 2.385 0.0244 2.433 2.337
C57BL/6J f 2.2945 0.0244 2.3425 2.2465
C57BL/6J m 2.2845 0.0244 2.3325 2.2365
CAST/EiJ f 1.9055 0.0244 1.9535 1.8575
CAST/EiJ m 1.985 0.0244 2.033 1.937
CBA/J f 2.152 0.0244 2.2 2.104
CBA/J m 2.138 0.0244 2.186 2.09
DBA/2J f 2.1765 0.0244 2.2245 2.1285
DBA/2J m 2.1655 0.0244 2.2135 2.1175
FVB/NJ f 2.3245 0.0244 2.3725 2.2765
FVB/NJ m 2.348 0.0244 2.396 2.3
MOLF/EiJ f 2.005 0.0244 2.053 1.957
MOLF/EiJ m 1.9865 0.0244 2.0345 1.9385
PERA/EiJ f 2.247 0.0244 2.295 2.199
PERA/EiJ m 2.265 0.0244 2.313 2.217
SJL/J f 2.029 0.0244 2.077 1.981
SJL/J m 2.097 0.0244 2.145 2.049


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 2.2172 0.0172 2.2512 2.1833
A/J both 2.1217 0.0172 2.1557 2.0878
BALB/cByJ both 2.3077 0.0172 2.3417 2.2738
C3H/HeJ both 2.0842 0.0172 2.1182 2.0503
C57BL/10J both 2.3682 0.0172 2.4022 2.3343
C57BL/6J both 2.2895 0.0172 2.3235 2.2555
CAST/EiJ both 1.9452 0.0172 1.9792 1.9113
CBA/J both 2.145 0.0172 2.179 2.111
DBA/2J both 2.171 0.0172 2.205 2.137
FVB/NJ both 2.3362 0.0172 2.3702 2.3023
MOLF/EiJ both 1.9957 0.0172 2.0297 1.9618
PERA/EiJ both 2.256 0.0172 2.29 2.222
SJL/J both 2.063 0.0172 2.097 2.029




  GWAS USING LINEAR MIXED MODELS