Phenotype measure:   Hadsell2   sulfur

ID, description, units MPD:110066   sulfur   milk sulfur (S) concentration   [mM]
Data set, strains Hadsell2   inbred   31 strains     sex: f     age: 14-20wks
Procedure mineral quantification
Ontology mappings

  STRAIN COMPARISON PLOT
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Hadsell2 - milk sulfur (S) concentration



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested31 strains
Mean of the strain means57.11   mM
Median of the strain means57.5   mM
SD of the strain means± 4.767
Coefficient of variation (CV)0.0835
Min–max range of strain means47.447   –   65.76   mM
Mean sample size per strain7.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 30 5397.3636 179.9121 4.6559 < 0.0001
Residuals 208 8037.5364 38.642


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 51.22 1.369   6 0.5589 0.0267 49.75, 53.67 -1.24
A/J f 58.95 3.4703   4 1.7351 0.0589 54.23, 61.88 0.39
AKR/J f 60.25 6.61   7 2.4984 0.1097 51.84, 68.14 0.66
BALB/cByJ f 65.76 6.472   9 2.1573 0.0984 57.11, 76.0 1.82
BTBR T+ Itpr3tf/J f 55.15 4.2472   7 1.6053 0.077 48.38, 60.01 -0.41
BUB/BnJ f 63.83 4.3558   7 1.6463 0.0682 59.09, 69.59 1.41
C3H/HeJ f 57.51 6.7457   9 2.2486 0.1173 47.24, 67.75 0.08
C57BL/6J f 53.42 6.9596   10 2.2008 0.1303 40.3, 61.48 -0.77
C57L/J f 51.71 6.3344   8 2.2395 0.1225 43.64, 61.84 -1.13
C58/J f 59.42 5.3184   6 2.1712 0.0895 51.79, 65.72 0.49
CBA/J f 60.7 7.7999   7 2.9481 0.1285 52.32, 75.08 0.75
CE/J f 64.39 8.7756   7 3.3169 0.1363 52.76, 81.41 1.53
CZECHII/EiJ f 49.815 15.507   2   10.965 0.3113 38.85, 60.78 -1.53
DBA/1J f 57.5 6.8753   7 2.5986 0.1196 48.69, 67.81 0.08
DBA/2J f 55.9 2.6816   6 1.0948 0.048 52.32, 60.14 -0.25
FVB/NJ f 58.88 5.5729   7 2.1063 0.0947 50.45, 66.38 0.37
I/LnJ f 59.81 4.7557   5 2.1268 0.0795 53.03, 64.75 0.57
KK/HlJ f 55.31 10.452   4 5.2261 0.189 46.76, 69.31 -0.38
LG/J f 64.5 7.0124   9 2.3375 0.1087 51.93, 74.33 1.55
LP/J f 54.7 3.649   11 1.1002 0.0667 49.66, 60.01 -0.51
MA/MyJ f 56.0 10.207   9 3.4024 0.1823 43.82, 75.37 -0.23
NOD/ShiLtJ f 59.21 5.9242   8 2.0945 0.1 51.98, 68.33 0.44
NON/ShiLtJ f 52.39 2.5286   7 0.95572 0.0483 48.61, 56.91 -0.99
NZW/LacJ f 51.2 3.9841   8 1.4086 0.0778 45.41, 56.8 -1.24
PL/J f 47.447 5.9384   8 2.0995 0.1252 35.81, 53.93 -2.03
QSi5 f 65.5 4.5486   14 1.2157 0.0694 57.91, 73.03 1.76
RIIIS/J f 59.51 9.1821   12 2.6506 0.1543 43.64, 73.47 0.5
SEA/GnJ f 58.54 4.3211   11 1.3029 0.0738 51.25, 66.58 0.3
SJL/J f 52.77 7.2252   5 3.2312 0.1369 46.38, 63.07 -0.91
SM/J f 54.18 4.9482   8 1.7495 0.0913 47.93, 62.48 -0.61
SWR/J f 54.86 4.3977   11 1.326 0.0802 48.78, 62.54 -0.47


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 51.22 2.5377812406 56.2230698935 46.2169301065
A/J f 58.9525 3.1081345592 65.0799841933 52.8250158067
AKR/J f 60.2528571429 2.3495288814 64.8847998109 55.6209144748
BALB/cByJ f 65.7644444444 2.0720897061 69.8494339067 61.6794549822
BTBR T+ Itpr3tf/J f 55.1457142857 2.3495288814 59.7776569537 50.5137716177
BUB/BnJ f 63.8257142857 2.3495288814 68.4576569537 59.1937716177
C3H/HeJ f 57.5122222222 2.0720897061 61.5972116844 53.42723276
C57BL/6J f 53.423 1.9657568963 57.2983612755 49.5476387245
C57L/J f 51.715 2.1977830236 56.0477856247 47.3822143753
C58/J f 59.4183333333 2.5377812406 64.4214032269 54.4152634398
CBA/J f 60.7042857143 2.3495288814 65.3362283823 56.0723430463
CE/J f 64.39 2.3495288814 69.021942668 59.758057332
CZECHII/EiJ f 49.815 4.3955660473 58.4805712494 41.1494287506
DBA/1J f 57.4957142857 2.3495288814 62.1276569537 52.8637716177
DBA/2J f 55.895 2.5377812406 60.8980698935 50.8919301065
FVB/NJ f 58.8785714286 2.3495288814 63.5105140966 54.2466287606
I/LnJ f 59.81 2.780000063 65.2905884749 54.3294115251
KK/HlJ f 55.315 3.1081345592 61.4424841933 49.1875158067
LG/J f 64.4966666667 2.0720897061 68.5816561289 60.4116772044
LP/J f 54.6972727273 1.8742756601 58.3922847233 51.0022607313
MA/MyJ f 56.0033333333 2.0720897061 60.0883227956 51.9183438711
NOD/ShiLtJ f 59.21375 2.1977830236 63.5465356247 54.8809643753
NON/ShiLtJ f 52.3857142857 2.3495288814 57.0176569537 47.7537716177
NZW/LacJ f 51.20125 2.1977830236 55.5340356247 46.8684643753
PL/J f 47.4475 2.1977830236 51.7802856247 43.1147143753
QSi5 f 65.5021428571 1.6613678046 68.7774209278 62.2268647865
RIIIS/J f 59.5108333333 1.7944823244 63.0485379818 55.9731286849
SEA/GnJ f 58.5381818182 1.8742756601 62.2331938142 54.8431698222
SJL/J f 52.774 2.780000063 58.2545884749 47.2934115251
SM/J f 54.17875 2.1977830236 58.5115356247 49.8459643753
SWR/J f 54.8609090909 1.8742756601 58.5559210869 51.1658970949




  GWAS USING LINEAR MIXED MODELS