Phenotype measure:   Hadsell2   sodium

ID, description, units MPD:110065   sodium   milk sodium (Na) concentration   [mM]
Data set, strains Hadsell2   inbred   31 strains     sex: f     age: 14-20wks
Procedure mineral quantification
Ontology mappings

  STRAIN COMPARISON PLOT
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Hadsell2 - milk sodium (Na) concentration



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested31 strains
Mean of the strain means34.175   mM
Median of the strain means32.518   mM
SD of the strain means± 4.943
Coefficient of variation (CV)0.1446
Min–max range of strain means26.456   –   45.493   mM
Mean sample size per strain7.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 30 5899.3215 196.644 1.6236 0.0271
Residuals 208 25192.2513 121.1166


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 41.315 11.4   6 4.654 0.2759 26.59, 61.36 1.44
A/J f 29.595 4.7187   4 2.3593 0.1594 24.19, 35.07 -0.93
AKR/J f 38.15 9.3195   7 3.5225 0.2443 20.65, 48.22 0.8
BALB/cByJ f 30.26 4.4486   9 1.4829 0.147 25.0, 38.64 -0.79
BTBR T+ Itpr3tf/J f 32.321 4.945   7 1.869 0.153 26.28, 38.47 -0.38
BUB/BnJ f 31.759 5.5832   7 2.1103 0.1758 25.26, 41.04 -0.49
C3H/HeJ f 30.914 7.6665   9 2.5555 0.248 22.82, 46.71 -0.66
C57BL/6J f 26.456 7.6803   10 2.4287 0.2903 15.73, 38.14 -1.56
C57L/J f 29.145 6.3736   8 2.2534 0.2187 21.41, 38.19 -1.02
C58/J f 30.375 3.0307   6 1.2373 0.0998 26.44, 34.27 -0.77
CBA/J f 29.891 3.2924   7 1.2444 0.1101 25.11, 35.2 -0.87
CE/J f 30.233 10.098   7 3.8166 0.334 21.41, 49.8 -0.8
CZECHII/EiJ f 38.01 1.5981   2   1.13 0.042 36.88, 39.14 0.78
DBA/1J f 32.319 8.0026   7 3.0247 0.2476 19.73, 44.1 -0.38
DBA/2J f 35.773 6.2511   6 2.552 0.1747 30.07, 46.74 0.32
FVB/NJ f 34.913 9.007   7 3.4043 0.258 19.08, 45.63 0.15
I/LnJ f 28.438 3.8316   5 1.7135 0.1347 24.04, 34.03 -1.16
KK/HlJ f 35.383 6.091   4 3.0455 0.1721 30.5, 44.28 0.24
LG/J f 45.493 46.831   9 15.61 1.0294 26.91, 170.2 2.29
LP/J f 31.904 3.8336   11 1.1559 0.1202 25.35, 39.36 -0.46
MA/MyJ f 30.986 6.1459   9 2.0486 0.1983 24.0, 40.71 -0.65
NOD/ShiLtJ f 35.656 3.2615   8 1.1531 0.0915 30.37, 40.6 0.3
NON/ShiLtJ f 32.831 4.6883   7 1.772 0.1428 28.0, 37.82 -0.27
NZW/LacJ f 35.71 3.2165   8 1.1372 0.0901 30.18, 40.71 0.31
PL/J f 40.453 7.1317   8 2.5214 0.1763 28.0, 48.54 1.27
QSi5 f 32.835 7.0308   14 1.8791 0.2141 24.48, 53.72 -0.27
RIIIS/J f 29.821 4.1359   12 1.1939 0.1387 24.28, 35.64 -0.88
SEA/GnJ f 32.518 3.1946   11 0.96321 0.0982 27.26, 37.66 -0.34
SJL/J f 42.886 4.5374   5 2.0292 0.1058 38.82, 50.48 1.76
SM/J f 38.067 4.9816   8 1.7613 0.1309 29.46, 46.3 0.79
SWR/J f 45.012 6.3054   11 1.9011 0.1401 34.66, 57.75 2.19


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 41.315 4.4928942579 50.1724474571 32.4575525429
A/J f 29.595 5.5026492 40.4431133467 18.7468866533
AKR/J f 38.15 4.1596118101 46.3504028884 29.9495971116
BALB/cByJ f 30.26 3.6684328 37.4920755644 23.0279244356
BTBR T+ Itpr3tf/J f 32.3214285714 4.1596118101 40.5218314599 24.121025683
BUB/BnJ f 31.7585714286 4.1596118101 39.958974317 23.5581685401
C3H/HeJ f 30.9144444444 3.6684328 38.1465200089 23.68236888
C57BL/6J f 26.456 3.4801809274 33.3169492982 19.5950507018
C57L/J f 29.145 3.8909605638 36.8157745105 21.4742254895
C58/J f 30.375 4.4928942579 39.2324474571 21.5175525429
CBA/J f 29.8914285714 4.1596118101 38.0918314599 21.691025683
CE/J f 30.2328571429 4.1596118101 38.4332600313 22.0324542544
CZECHII/EiJ f 38.01 7.7819211277 53.351549021 22.668450979
DBA/1J f 32.3185714286 4.1596118101 40.518974317 24.1181685401
DBA/2J f 35.7733333333 4.4928942579 44.6307807904 26.9158858763
FVB/NJ f 34.9128571429 4.1596118101 43.1132600313 26.7124542544
I/LnJ f 28.438 4.9217190671 38.1408475483 18.7351524517
KK/HlJ f 35.3825 5.5026492 46.2306133467 24.5343866533
LG/J f 45.4933333333 3.6684328 52.7254088978 38.2612577689
LP/J f 31.9036363636 3.3182223181 38.4452948462 25.3619778811
MA/MyJ f 30.9855555556 3.6684328 38.21763112 23.7534799911
NOD/ShiLtJ f 35.65625 3.8909605638 43.3270245105 27.9854754895
NON/ShiLtJ f 32.8314285714 4.1596118101 41.0318314599 24.631025683
NZW/LacJ f 35.71 3.8909605638 43.3807745105 28.0392254895
PL/J f 40.4525 3.8909605638 48.1232745105 32.7817254895
QSi5 f 32.835 2.941289718 38.6335604909 27.0364395091
RIIIS/J f 29.8208333333 3.1769559969 36.0839944942 23.5576721724
SEA/GnJ f 32.5181818182 3.3182223181 39.0598403007 25.9765233356
SJL/J f 42.886 4.9217190671 52.5888475483 33.1831524517
SM/J f 38.0675 3.8909605638 45.7382745105 30.3967254895
SWR/J f 45.0118181818 3.3182223181 51.5534766644 38.4701596993




  GWAS USING LINEAR MIXED MODELS