Phenotype measure:   Hadsell2   iron

ID, description, units MPD:110061   iron   milk iron (Fe) concentration   [µM]
Data set, strains Hadsell2   inbred   31 strains     sex: f     age: 14-20wks
Procedure mineral quantification
Ontology mappings

  STRAIN COMPARISON PLOT
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Hadsell2 - milk iron (Fe) concentration



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested31 strains
Mean of the strain means264.6   µM
Median of the strain means261.4   µM
SD of the strain means± 45.282
Coefficient of variation (CV)0.1711
Min–max range of strain means172.8   –   376.8   µM
Mean sample size per strain7.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 30 521386.3267 17379.5442 5.2721 < 0.0001
Residuals 208 685670.7889 3296.4942


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 374.3 47.135   6 19.243 0.1259 320.6, 445.8 2.42
A/J f 256.2 69.81   4 34.907 0.2725 209.3, 358.3 -0.19
AKR/J f 248.8 35.386   7 13.375 0.1423 195.8, 311.8 -0.35
BALB/cByJ f 270.0 41.935   9 13.978 0.1553 223.8, 333.1 0.12
BTBR T+ Itpr3tf/J f 252.8 73.6   7 27.819 0.2911 172.3, 335.4 -0.26
BUB/BnJ f 311.6 87.51   7 33.075 0.2809 158.7, 402.6 1.04
C3H/HeJ f 261.4 73.51   9 24.504 0.2812 145.2, 363.4 -0.07
C57BL/6J f 211.8 34.578   10 10.935 0.1632 151.9, 247.5 -1.17
C57L/J f 232.9 57.01   8 20.156 0.2448 174.5, 345.1 -0.7
C58/J f 235.9 44.901   6 18.331 0.1904 175.7, 303.4 -0.63
CBA/J f 327.3 66.84   7 25.262 0.2042 259.1, 418.0 1.38
CE/J f 267.2 49.565   7 18.734 0.1855 213.7, 363.3 0.06
CZECHII/EiJ f 275.0 88.88   2   62.85 0.3232 212.2, 337.9 0.23
DBA/1J f 284.2 44.123   7 16.677 0.1553 247.3, 372.1 0.43
DBA/2J f 290.8 41.323   6 16.87 0.1421 236.7, 343.8 0.58
FVB/NJ f 242.7 43.47   7 16.43 0.1791 174.4, 294.1 -0.48
I/LnJ f 241.1 38.978   5 17.432 0.1617 182.9, 286.1 -0.52
KK/HlJ f 229.0 18.026   4 9.013 0.0787 210.8, 249.6 -0.79
LG/J f 267.2 87.37   9 29.124 0.327 131.7, 393.9 0.06
LP/J f 252.7 55.07   11 16.604 0.2179 168.1, 359.2 -0.26
MA/MyJ f 287.0 60.88   9 20.292 0.2121 206.5, 415.3 0.49
NOD/ShiLtJ f 228.4 41.186   8 14.561 0.1803 192.3, 321.5 -0.8
NON/ShiLtJ f 292.1 54.75   7 20.694 0.1874 206.9, 381.3 0.61
NZW/LacJ f 193.3 31.562   8 11.159 0.1633 150.2, 246.7 -1.58
PL/J f 290.9 67.75   8 23.952 0.2329 223.2, 438.3 0.58
QSi5 f 289.3 60.42   14 16.147 0.2089 181.8, 417.1 0.54
RIIIS/J f 255.0 53.26   12 15.374 0.2088 186.3, 372.6 -0.21
SEA/GnJ f 172.8 58.18   11 17.541 0.3366 81.75, 273.6 -2.03
SJL/J f 285.1 56.88   5 25.437 0.1995 196.4, 350.6 0.45
SM/J f 200.5 49.1   8 17.359 0.2449 136.6, 285.8 -1.42
SWR/J f 376.8 72.61   11 21.893 0.1927 251.5, 541.7 2.48


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 374.2833333333 23.43961809 420.4930088185 328.0736578482
A/J f 256.2 28.7075520431 312.7950630591 199.6049369409
AKR/J f 248.7571428571 21.7008695587 291.5389892252 205.9752964891
BALB/cByJ f 269.9888888889 19.1383680287 307.7189309283 232.2588468495
BTBR T+ Itpr3tf/J f 252.8428571429 21.7008695587 295.6247035109 210.0610107748
BUB/BnJ f 311.5571428571 21.7008695587 354.3389892252 268.7752964891
C3H/HeJ f 261.4222222222 19.1383680287 299.1522642616 223.6921801828
C57BL/6J f 211.84 18.1562501008 247.6338607175 176.0461392825
C57L/J f 232.875 20.299304721 272.8937528707 192.8562471293
C58/J f 235.8833333333 23.43961809 282.0930088185 189.6736578482
CBA/J f 327.3142857143 21.7008695587 370.0961320824 284.5324393462
CE/J f 267.1714285714 21.7008695587 309.9532749395 224.3895822033
CZECHII/EiJ f 275.05 40.5986094419 355.0875057415 195.0124942585
DBA/1J f 284.1857142857 21.7008695587 326.9675606538 241.4038679176
DBA/2J f 290.7666666667 23.43961809 336.9763421518 244.5569911815
FVB/NJ f 242.7285714286 21.7008695587 285.5104177967 199.9467250605
I/LnJ f 241.1 25.6768151344 291.7201632764 190.4798367236
KK/HlJ f 229.0 28.7075520431 285.5950630591 172.4049369409
LG/J f 267.1666666667 19.1383680287 304.896708706 229.4366246273
LP/J f 252.7 17.3113052321 286.8281071188 218.5718928812
MA/MyJ f 287.0 19.1383680287 324.7300420394 249.2699579606
NOD/ShiLtJ f 228.4125 20.299304721 268.4312528707 188.3937471293
NON/ShiLtJ f 292.1428571429 21.7008695587 334.9247035109 249.3610107748
NZW/LacJ f 193.275 20.299304721 233.2937528707 153.2562471293
PL/J f 290.875 20.299304721 330.8937528707 250.8562471293
QSi5 f 289.2571428571 15.3448320226 319.5084765357 259.0058091786
RIIIS/J f 255.0416666667 16.5743128999 287.7168415586 222.3664917747
SEA/GnJ f 172.8318181818 17.3113052321 206.9599253006 138.703711063
SJL/J f 285.06 25.6768151344 335.6801632764 234.4398367236
SM/J f 200.5125 20.299304721 240.5312528707 160.4937471293
SWR/J f 376.8272727273 17.3113052321 410.9553798461 342.6991656085




  GWAS USING LINEAR MIXED MODELS