Phenotype measure:   Everett1   mid_length

ID, description, units MPD:11005   mid_length   mandible, infradentale to posterior ramus   [mm]
Data set, strains Everett1   inbred   14 strains     sex: both     age: 8-9wks
Procedure bone dimensions
Ontology mappings

  STRAIN COMPARISON PLOT
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Everett1 - mandible, infradentale to posterior ramus



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested14 strains13 strains
Mean of the strain means8.65   mm 8.78   mm
Median of the strain means8.65   mm 8.88   mm
SD of the strain means± 0.395 ± 0.429
Coefficient of variation (CV)0.0457 0.0488
Min–max range of strain means7.74   –   9.19   mm 7.87   –   9.33   mm
Mean sample size per strain10.0   mice 10.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.8142 0.8142 27.2953 < 0.0001
strain 12 41.1922 3.4327 115.0718 < 0.0001
sex:strain 12 0.5994 0.0499 1.6744 0.0733
Residuals 234 6.9804 0.0298


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 9.19 0.141   10 0.0445 0.0153 8.94, 9.4 1.36
129S1/SvImJ m 9.33 0.144   10 0.0454 0.0154 9.12, 9.57 1.28
A/J f 8.59 0.157   10 0.0496 0.0183 8.3, 8.79 -0.15
A/J m 8.67 0.217   10 0.0687 0.025 8.3, 9.05 -0.26
BALB/cByJ f 9.11 0.166   10 0.0526 0.0183 8.79, 9.32 1.16
BALB/cByJ m 9.15 0.0981   10 0.031 0.0107 9.01, 9.36 0.86
C3H/HeJ f 8.97 0.223   10 0.0704 0.0248 8.6, 9.31 0.81
C3H/HeJ m 9.15 0.119   10 0.0377 0.013 8.96, 9.38 0.86
C57BL/10J f 9.0 0.234   10 0.0741 0.0261 8.55, 9.34 0.88
C57BL/10J m 9.07 0.324   10 0.102 0.0357 8.28, 9.38 0.67
C57BL/6J f 9.03 0.17   10 0.0538 0.0188 8.69, 9.26 0.96
C57BL/6J m 9.14 0.101   10 0.032 0.0111 8.96, 9.29 0.84
CAST/EiJ f 7.74 0.117   10 0.0371 0.0151 7.57, 7.96 -2.3
CAST/EiJ m 7.87 0.159   10 0.0502 0.0202 7.64, 8.19 -2.12
CBA/J f 8.39 0.245   10 0.0773 0.0291 7.76, 8.65 -0.66
CBA/J m 8.65 0.209   10 0.0662 0.0242 8.33, 8.89 -0.3
DBA/2J f 8.41 0.205   10 0.0648 0.0243 8.04, 8.65 -0.61
DBA/2J m 8.42 0.123   10 0.0388 0.0146 8.18, 8.65 -0.84
FVB/NJ f 8.69 0.105   10 0.0332 0.0121 8.48, 8.86 0.1
FVB/NJ m 8.88 0.0828   10 0.0262 0.00932 8.76, 9.01 0.23
MOLF/EiJ f 8.26 0.115   10 0.0365 0.014 8.0, 8.42 -0.99
MOLF/EiJ m 8.14 0.142   10 0.0449 0.0174 7.92, 8.39 -1.49
PERA/EiJ f 8.65 0.149   10 0.0472 0.0173 8.39, 8.83 0.0
PERA/EiJ m 8.8 0.12   10 0.0379 0.0136 8.64, 8.96 0.04
SJL/J f 8.65 0.208   10 0.0657 0.024 8.37, 8.9 0.0
SJL/J m 8.88 0.18   10 0.0569 0.0203 8.39, 9.04 0.23
SPRET/EiJ f 8.43 0.19   8 0.0671 0.0225 8.06, 8.62 -0.56


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 9.185 0.0546 9.2926 9.0774
129S1/SvImJ m 9.3285 0.0546 9.4361 9.2209
A/J f 8.586 0.0546 8.6936 8.4784
A/J m 8.6715 0.0546 8.7791 8.5639
BALB/cByJ f 9.1105 0.0546 9.2181 9.0029
BALB/cByJ m 9.15 0.0546 9.2576 9.0424
C3H/HeJ f 8.9735 0.0546 9.0811 8.8659
C3H/HeJ m 9.1505 0.0546 9.2581 9.0429
C57BL/10J f 8.998 0.0546 9.1056 8.8904
C57BL/10J m 9.0715 0.0546 9.1791 8.9639
C57BL/6J f 9.031 0.0546 9.1386 8.9234
C57BL/6J m 9.1395 0.0546 9.2471 9.0319
CAST/EiJ f 7.7435 0.0546 7.8511 7.6359
CAST/EiJ m 7.8655 0.0546 7.9731 7.7579
CBA/J f 8.3935 0.0546 8.5011 8.2859
CBA/J m 8.6475 0.0546 8.7551 8.5399
DBA/2J f 8.412 0.0546 8.5196 8.3044
DBA/2J m 8.422 0.0546 8.5296 8.3144
FVB/NJ f 8.6905 0.0546 8.7981 8.5829
FVB/NJ m 8.879 0.0546 8.9866 8.7714
MOLF/EiJ f 8.2635 0.0546 8.3711 8.1559
MOLF/EiJ m 8.138 0.0546 8.2456 8.0304
PERA/EiJ f 8.6465 0.0546 8.7541 8.5389
PERA/EiJ m 8.8015 0.0546 8.9091 8.6939
SJL/J f 8.654 0.0546 8.7616 8.5464
SJL/J m 8.8775 0.0546 8.9851 8.7699


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 9.2568 0.0386 9.3328 9.1807
A/J both 8.6288 0.0386 8.7048 8.5527
BALB/cByJ both 9.1303 0.0386 9.2063 9.0542
C3H/HeJ both 9.062 0.0386 9.1381 8.9859
C57BL/10J both 9.0348 0.0386 9.1108 8.9587
C57BL/6J both 9.0853 0.0386 9.1613 9.0092
CAST/EiJ both 7.8045 0.0386 7.8806 7.7284
CBA/J both 8.5205 0.0386 8.5966 8.4444
DBA/2J both 8.417 0.0386 8.4931 8.3409
FVB/NJ both 8.7848 0.0386 8.8608 8.7087
MOLF/EiJ both 8.2008 0.0386 8.2768 8.1247
PERA/EiJ both 8.724 0.0386 8.8001 8.6479
SJL/J both 8.7658 0.0386 8.8418 8.6897




  GWAS USING LINEAR MIXED MODELS