Phenotype measure:   Everett1   post_length

ID, description, units MPD:11004   post_length   mandible, menton to gonion   [mm]
Data set, strains Everett1   inbred   14 strains     sex: both     age: 8-9wks
Procedure bone dimensions
Ontology mappings

  STRAIN COMPARISON PLOT
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Everett1 - mandible, menton to gonion



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested14 strains13 strains
Mean of the strain means6.56   mm 6.73   mm
Median of the strain means6.64   mm 6.79   mm
SD of the strain means± 0.366 ± 0.420
Coefficient of variation (CV)0.0558 0.0624
Min–max range of strain means5.76   –   7.23   mm 5.71   –   7.39   mm
Mean sample size per strain9.8   mice 9.9   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 1.4734 1.4734 54.0984 < 0.0001
strain 12 36.9166 3.0764 112.9549 < 0.0001
sex:strain 12 0.5952 0.0496 1.821 0.0459
Residuals 229 6.2369 0.0272


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 6.82 0.132   10 0.0418 0.0194 6.55, 6.97 0.71
129S1/SvImJ m 6.94 0.163   10 0.0516 0.0235 6.6, 7.2 0.49
A/J f 6.72 0.255   8 0.0902 0.038 6.36, 7.08 0.43
A/J m 6.79 0.216   9 0.0719 0.0318 6.42, 7.15 0.13
BALB/cByJ f 7.23 0.127   10 0.0402 0.0176 7.05, 7.49 1.83
BALB/cByJ m 7.39 0.16   10 0.0507 0.0217 6.98, 7.58 1.56
C3H/HeJ f 6.8 0.157   10 0.0496 0.0231 6.56, 7.01 0.65
C3H/HeJ m 7.18 0.149   10 0.047 0.0207 7.01, 7.43 1.06
C57BL/10J f 6.47 0.198   10 0.0627 0.0306 6.03, 6.75 -0.25
C57BL/10J m 6.61 0.0881   8 0.0311 0.0133 6.51, 6.75 -0.29
C57BL/6J f 6.66 0.114   10 0.0359 0.017 6.51, 6.82 0.27
C57BL/6J m 6.79 0.0872   10 0.0276 0.0128 6.68, 6.96 0.13
CAST/EiJ f 5.98 0.123   10 0.0388 0.0206 5.81, 6.14 -1.59
CAST/EiJ m 6.14 0.137   10 0.0435 0.0224 5.88, 6.35 -1.41
CBA/J f 6.63 0.0968   10 0.0306 0.0146 6.39, 6.74 0.19
CBA/J m 6.85 0.167   10 0.0528 0.0244 6.57, 7.12 0.28
DBA/2J f 6.7 0.197   10 0.0622 0.0293 6.25, 6.88 0.38
DBA/2J m 6.78 0.117   10 0.0369 0.0172 6.54, 6.98 0.11
FVB/NJ f 6.62 0.126   10 0.0399 0.0191 6.34, 6.82 0.16
FVB/NJ m 6.78 0.104   10 0.0328 0.0153 6.64, 6.99 0.11
MOLF/EiJ f 5.76 0.207   10 0.0656 0.036 5.4, 6.04 -2.19
MOLF/EiJ m 5.71 0.15   10 0.0473 0.0262 5.54, 5.96 -2.44
PERA/EiJ f 6.7 0.244   10 0.0771 0.0364 6.29, 7.07 0.38
PERA/EiJ m 6.81 0.27   10 0.0854 0.0397 6.5, 7.15 0.18
SJL/J f 6.52 0.156   10 0.0494 0.024 6.25, 6.71 -0.11
SJL/J m 6.77 0.174   10 0.0549 0.0256 6.4, 7.07 0.09
SPRET/EiJ f 6.25 0.143   8 0.0506 0.0229 6.1, 6.45 -0.85


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 6.817 0.0522 6.9198 6.7142
129S1/SvImJ m 6.937 0.0522 7.0398 6.8342
A/J f 6.7156 0.0583 6.8306 6.6007
A/J m 6.7878 0.055 6.8962 6.6794
BALB/cByJ f 7.231 0.0522 7.3338 7.1282
BALB/cByJ m 7.3895 0.0522 7.4923 7.2867
C3H/HeJ f 6.803 0.0522 6.9058 6.7002
C3H/HeJ m 7.179 0.0522 7.2818 7.0762
C57BL/10J f 6.4665 0.0522 6.5693 6.3637
C57BL/10J m 6.6087 0.0583 6.7237 6.4938
C57BL/6J f 6.6635 0.0522 6.7663 6.5607
C57BL/6J m 6.7895 0.0522 6.8923 6.6867
CAST/EiJ f 5.9755 0.0522 6.0783 5.8727
CAST/EiJ m 6.136 0.0522 6.2388 6.0332
CBA/J f 6.634 0.0522 6.7368 6.5312
CBA/J m 6.8535 0.0522 6.9563 6.7507
DBA/2J f 6.6985 0.0522 6.8013 6.5957
DBA/2J m 6.784 0.0522 6.8868 6.6812
FVB/NJ f 6.6165 0.0522 6.7193 6.5137
FVB/NJ m 6.779 0.0522 6.8818 6.6762
MOLF/EiJ f 5.761 0.0522 5.8638 5.6582
MOLF/EiJ m 5.7125 0.0522 5.8153 5.6097
PERA/EiJ f 6.7025 0.0522 6.8053 6.5997
PERA/EiJ m 6.806 0.0522 6.9088 6.7032
SJL/J f 6.515 0.0522 6.6178 6.4122
SJL/J m 6.767 0.0522 6.8698 6.6642


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 6.877 0.0369 6.9497 6.8043
A/J both 6.7517 0.0401 6.8307 6.6727
BALB/cByJ both 7.3102 0.0369 7.383 7.2375
C3H/HeJ both 6.991 0.0369 7.0637 6.9183
C57BL/10J both 6.5376 0.0391 6.6147 6.4605
C57BL/6J both 6.7265 0.0369 6.7992 6.6538
CAST/EiJ both 6.0557 0.0369 6.1285 5.983
CBA/J both 6.7437 0.0369 6.8165 6.671
DBA/2J both 6.7412 0.0369 6.814 6.6685
FVB/NJ both 6.6977 0.0369 6.7705 6.625
MOLF/EiJ both 5.7367 0.0369 5.8095 5.664
PERA/EiJ both 6.7542 0.0369 6.827 6.6815
SJL/J both 6.641 0.0369 6.7137 6.5683




  GWAS USING LINEAR MIXED MODELS