Project measure / variable:   Deschepper1   thymus_adj

ID, description, units MPD:10416   thymus_adj   thymus weight   [mg]  normalized to bw  
Data set, strains Deschepper1   inbred   13 strains     sex: both     age: 10wks
Procedure organ weights
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  STRAIN COMPARISON PLOT
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Deschepper1 - thymus weight normalized to bw



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested13 strains13 strains
Mean of the strain means2.17   mg 1.70   mg
Median of the strain means2.15   mg 1.65   mg
SD of the strain means± 0.818 ± 0.562
Coefficient of variation (CV)0.376 0.330
Min–max range of strain means0.977   –   4.42   mg 0.633   –   2.39   mg
Mean sample size per strain9.8   mice 9.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 13.4322 13.4322 28.3792 < 0.0001
strain 12 86.4092 7.2008 15.2136 < 0.0001
sex:strain 12 29.899 2.4916 5.2641 < 0.0001
Residuals 226 106.9685 0.4733


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 2.15 0.48   8 0.17 0.223 1.69, 2.92 -0.03
129S1/SvImJ m 1.65 0.483   11 0.146 0.293 1.0, 2.25 -0.09
A/J f 2.38 0.478   10 0.151 0.201 1.89, 3.49 0.25
A/J m 1.55 0.474   10 0.15 0.306 0.92, 2.33 -0.27
AKR/J f 4.42 0.341   10 0.108 0.0771 3.75, 4.88 2.75
AKR/J m 2.39 0.425   10 0.135 0.178 1.75, 2.9 1.22
BALB/cByJ f 2.29 0.347   10 0.11 0.151 1.71, 2.62 0.14
BALB/cByJ m 1.6 0.581   10 0.184 0.364 0.66, 2.83 -0.18
C3H/HeJ f 2.7 0.474   10 0.15 0.176 2.09, 3.81 0.64
C3H/HeJ m 2.39 0.549   10 0.174 0.23 1.51, 3.5 1.22
C57BL/6J f 2.25 0.513   10 0.162 0.228 1.54, 3.07 0.09
C57BL/6J m 1.07 0.284   9 0.0945 0.266 0.83, 1.55 -1.13
C57L/J f 2.02 0.331   10 0.105 0.164 1.5, 2.58 -0.19
C57L/J m 1.73 0.27   10 0.0855 0.156 1.38, 2.19 0.05
CAST/EiJ f 0.977 0.0134   10 0.00423 0.0137 0.96, 1.0 -1.46
CAST/EiJ m 0.987 0.115   8 0.0407 0.117 0.84, 1.21 -1.27
CBA/J f 1.44 0.281   10 0.089 0.195 0.97, 1.82 -0.9
CBA/J m 2.25 0.432   9 0.144 0.192 1.65, 3.15 0.97
DBA/2J f 1.78 0.381   10 0.12 0.214 1.04, 2.57 -0.48
DBA/2J m 2.23 0.725   10 0.229 0.325 1.23, 3.19 0.94
FVB/NJ f 1.94 0.5   9 0.167 0.257 1.46, 3.03 -0.28
FVB/NJ m 1.56 0.572   10 0.181 0.367 0.8, 2.3 -0.25
PWK/PhJ f 1.54 2.69   10 0.852 1.75 0.29, 9.18 -0.77
PWK/PhJ m 0.633 0.28   10 0.0884 0.442 0.33, 1.35 -1.9
SJL/J f 2.36 0.451   9 0.15 0.191 1.83, 3.32 0.23
SJL/J m 2.1 0.486   9 0.162 0.231 1.47, 2.99 0.71


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 2.1475 0.2432 2.6268 1.6682
129S1/SvImJ m 1.6518 0.2074 2.0606 1.2431
A/J f 2.376 0.2176 2.8047 1.9473
A/J m 1.545 0.2176 1.9737 1.1163
AKR/J f 4.42 0.2176 4.8487 3.9913
AKR/J m 2.393 0.2176 2.8217 1.9643
BALB/cByJ f 2.295 0.2176 2.7237 1.8663
BALB/cByJ m 1.598 0.2176 2.0267 1.1693
C3H/HeJ f 2.697 0.2176 3.1257 2.2683
C3H/HeJ m 2.392 0.2176 2.8207 1.9633
C57BL/6J f 2.248 0.2176 2.6767 1.8193
C57BL/6J m 1.0678 0.2293 1.5197 0.6159
C57L/J f 2.018 0.2176 2.4467 1.5893
C57L/J m 1.73 0.2176 2.1587 1.3013
CAST/EiJ f 0.977 0.2176 1.4057 0.5483
CAST/EiJ m 0.9875 0.2432 1.4668 0.5082
CBA/J f 1.442 0.2176 1.8707 1.0133
CBA/J m 2.2489 0.2293 2.7008 1.797
DBA/2J f 1.781 0.2176 2.2097 1.3523
DBA/2J m 2.232 0.2176 2.6607 1.8033
FVB/NJ f 1.9433 0.2293 2.3952 1.4914
FVB/NJ m 1.559 0.2176 1.9877 1.1303
PWK/PhJ f 1.539 0.2176 1.9677 1.1103
PWK/PhJ m 0.633 0.2176 1.0617 0.2043
SJL/J f 2.3622 0.2293 2.8141 1.9103
SJL/J m 2.1044 0.2293 2.5563 1.6526


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 1.8997 0.1598 2.2146 1.5847
A/J both 1.9605 0.1538 2.2636 1.6574
AKR/J both 3.4065 0.1538 3.7096 3.1034
BALB/cByJ both 1.9465 0.1538 2.2496 1.6434
C3H/HeJ both 2.5445 0.1538 2.8476 2.2414
C57BL/6J both 1.6579 0.1581 1.9693 1.3464
C57L/J both 1.874 0.1538 2.1771 1.5709
CAST/EiJ both 0.9822 0.1632 1.3038 0.6607
CBA/J both 1.8454 0.1581 2.1569 1.534
DBA/2J both 2.0065 0.1538 2.3096 1.7034
FVB/NJ both 1.7512 0.1581 2.0626 1.4397
PWK/PhJ both 1.086 0.1538 1.3891 0.7829
SJL/J both 2.2333 0.1622 2.5529 1.9138




  GWAS USING LINEAR MIXED MODELS