MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region Y:954067-1280066

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
n-R5s1	Y	991630 to 991748	118	-	rRNA gene	nuclear encoded rRNA 5S 1
Gm47281	Y	991657 to 991716	59	-	miRNA gene	predicted gene, 47281
Eif2s3y	Y	1010543 to 1028847	18304	+	protein coding gene	eukaryotic translation initiation factor 2, subunit 3, structural gene Y-linked
Tssr164655	Y	1010587 to 1010613	26	+	TSS region	transcription start site region 164655
DYBish6	Y	1025218 to 1025340	122		DNA segment	DNA segment, Chr Y, Bishop 6
Gm29650	Y	1048393 to 1049134	741	+	lincRNA gene	predicted gene 29650
Tspy-ps	Y	1055764 to 1058868	3104	-	pseudogene	testis specific protein-Y encoded, pseudogene
Uty	Y	1096861 to 1245759	148898	-	protein coding gene	ubiquitously transcribed tetratricopeptide repeat gene, Y chromosome
Gm39552	Y	1114067 to 1120066	5999	-	lncRNA gene	predicted gene, 39552
Tssr164660	Y	1137178 to 1137181	3	-	TSS region	transcription start site region 164660
Tssr164661	Y	1197438 to 1197452	14	-	TSS region	transcription start site region 164661
Tssr164662	Y	1245655 to 1245676	21	-	TSS region	transcription start site region 164662
Tssr164663	Y	1245685 to 1245752	67	-	TSS region	transcription start site region 164663
Tssr164664	Y	1245753 to 1245766	13	-	TSS region	transcription start site region 164664
Ddx3y	Y	1260771 to 1286629	25858	-	protein coding gene	DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked
Gm4017	Y	1268548 to 1268885	337	-	pseudogene	predicted gene 4017
Tssr164665	Y	1270621 to 1270625	4	-	TSS region	transcription start site region 164665
Gm18665	Y	1277313 to 1277582	269	-	pseudogene	predicted gene, 18665