Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region Y:88416606-90897301

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81 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm28406 Y 88418292 to 88419873 1581 + lincRNA gene predicted gene 28406
Gm28978 Y 88430978 to 88431592 614 - pseudogene predicted gene 28978
Gm29436 Y 88474113 to 88477024 2911 + lincRNA gene predicted gene 29436
Gm20819 Y 88534613 to 88560905 26292 + pseudogene predicted gene, 20819
Gm29437 Y 88621155 to 88621850 695 - pseudogene predicted gene 29437
Gm28977 Y 88661193 to 88664536 3343 - lincRNA gene predicted gene 28977
Gm28407 Y 88696465 to 88699701 3236 + lincRNA gene predicted gene 28407
Gm21287 Y 88804770 to 88805453 683 - pseudogene predicted gene, 21287
Gm29390 Y 88885911 to 88886606 695 - pseudogene predicted gene 29390
Gm29391 Y 88915556 to 88916170 614 - pseudogene predicted gene 29391
Gm21720 Y 88952366 to 88953061 695 - pseudogene predicted gene, 21720
Gm29392 Y 88959176 to 88962524 3348 - lincRNA gene predicted gene 29392
Gm29393 Y 88994450 to 88997689 3239 + lincRNA gene predicted gene 29393
Gm21294 Y 89052806 to 89079015 26209 + protein coding gene predicted gene, 21294
Gm28672 Y 89222067 to 89225296 3229 + lincRNA gene predicted gene 28672
Gm21838 Y 89328773 to 89329468 695 - pseudogene predicted gene, 21838
Gm28670 Y 89391528 to 89394761 3233 + lincRNA gene predicted gene 28670
Gm28671 Y 89473657 to 89474348 691 - pseudogene predicted gene 28671
Gm28673 Y 89607659 to 89610894 3235 - lincRNA gene predicted gene 28673
Gm28674 Y 89636206 to 89639438 3232 - lincRNA gene predicted gene 28674
Gm28531 Y 89656606 to 89657301 695 + pseudogene predicted gene 28531
Gm21996 Y 89713424 to 89745532 32108 - protein coding gene predicted gene 21996
Gm21803 Y 89846231 to 89846923 692 + pseudogene predicted gene, 21803
Gm28930 Y 89927120 to 89935013 7893 - lincRNA gene predicted gene 28930
Gm20879 Y 89999717 to 90000411 694 + pseudogene predicted gene, 20879
Gm29504 Y 90275224 to 90277501 2277 + lincRNA gene predicted gene 29504
Gm20837 Y 90401275 to 90414119 12844 + protein coding gene predicted gene, 20837
Gm29503 Y 90499047 to 90531645 32598 - pseudogene predicted gene 29503
Gm28300 Y 90603501 to 90605864 2363 - lincRNA gene predicted gene 28300
Gm28301 Y 90665346 to 90667625 2279 - lincRNA gene predicted gene 28301
Tssr5752 Y 90734520 to 90734530 10 + TSS region transcription start site region 5752
Tssr5753 Y 90737526 to 90737539 13 + TSS region transcription start site region 5753
Tssr5754 Y 90737741 to 90737777 36 + TSS region transcription start site region 5754
Tssr5755 Y 90737785 to 90737948 163 - TSS region transcription start site region 5755
Tssr5756 Y 90737832 to 90737843 11 + TSS region transcription start site region 5756
Tssr5757 Y 90737861 to 90737880 19 + TSS region transcription start site region 5757
Tssr5758 Y 90737908 to 90737920 12 + TSS region transcription start site region 5758
Tssr5759 Y 90738153 to 90738195 42 + TSS region transcription start site region 5759
Tssr5760 Y 90738263 to 90738277 14 + TSS region transcription start site region 5760
Tssr5761 Y 90738281 to 90738290 9 + TSS region transcription start site region 5761
Tssr5762 Y 90738302 to 90738320 18 + TSS region transcription start site region 5762
Tssr5763 Y 90738342 to 90738372 30 + TSS region transcription start site region 5763
Tssr5764 Y 90738373 to 90738385 12 + TSS region transcription start site region 5764
Tssr5765 Y 90738463 to 90738496 33 + TSS region transcription start site region 5765
Tssr5766 Y 90738495 to 90738548 53 - TSS region transcription start site region 5766
Tssr5767 Y 90738590 to 90738631 41 - TSS region transcription start site region 5767
Tssr5768 Y 90738616 to 90738629 13 + TSS region transcription start site region 5768
Tssr5769 Y 90739392 to 90739398 6 - TSS region transcription start site region 5769
Tssr5770 Y 90741368 to 90741375 7 + TSS region transcription start site region 5770
Gm46714 Y 90741968 to 90750205 8237 - protein coding gene predicted gene, 46714
Tssr5771 Y 90742384 to 90742395 11 - TSS region transcription start site region 5771
Tssr5772 Y 90742520 to 90742536 16 - TSS region transcription start site region 5772
Tssr5773 Y 90742714 to 90742730 16 - TSS region transcription start site region 5773
Tssr5774 Y 90742736 to 90742754 18 - TSS region transcription start site region 5774
Tssr5775 Y 90742933 to 90742954 21 - TSS region transcription start site region 5775
Tssr5776 Y 90742961 to 90742974 13 - TSS region transcription start site region 5776
Tssr5777 Y 90743693 to 90743715 22 - TSS region transcription start site region 5777
Tssr5778 Y 90744364 to 90744389 25 - TSS region transcription start site region 5778
Mid1-ps1 Y 90753057 to 90763485 10428 + pseudogene midline 1, pseudogene 1
Gm21860 Y 90754513 to 90754821 308 - protein coding gene predicted gene, 21860
Gm47283 Y 90784738 to 90816464 31726 + protein coding gene predicted gene, 47283
Gm33272 Y 90793687 to 90806846 13159 + lncRNA gene predicted gene, 33272
Tssr5779 Y 90804543 to 90804554 11 + TSS region transcription start site region 5779
Tssr5780 Y 90811212 to 90811250 38 + TSS region transcription start site region 5780
Tssr5781 Y 90811405 to 90811419 14 + TSS region transcription start site region 5781
Tssr5782 Y 90811623 to 90811639 16 + TSS region transcription start site region 5782
Tssr5783 Y 90811705 to 90811717 12 + TSS region transcription start site region 5783
Tssr5784 Y 90811764 to 90811782 18 + TSS region transcription start site region 5784
Tssr5785 Y 90811787 to 90811805 18 + TSS region transcription start site region 5785
Tssr5786 Y 90811971 to 90811982 11 + TSS region transcription start site region 5786
Tssr5787 Y 90812014 to 90812133 119 + TSS region transcription start site region 5787
Tssr5788 Y 90812392 to 90812405 13 + TSS region transcription start site region 5788
Tssr5789 Y 90812423 to 90812510 87 + TSS region transcription start site region 5789
Tssr5790 Y 90812659 to 90812695 36 + TSS region transcription start site region 5790
Tssr5791 Y 90812664 to 90812797 133 - TSS region transcription start site region 5791
Tssr5792 Y 90813557 to 90813572 15 + TSS region transcription start site region 5792
Gm46717 Y 90824264 to 90829395 5131 - protein coding gene predicted gene, 46717
Tssr5793 Y 90825306 to 90825308 2 - TSS region transcription start site region 5793
Tssr5794 Y 90828709 to 90828750 41 - TSS region transcription start site region 5794
Gm21742 Y 90837413 to 90844040 6627 + pseudogene predicted gene, 21742
Gm21748 Y 90838869 to 90839177 308 - protein coding gene predicted gene, 21748