MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region Y:719709-1023309

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Zfy1	Y	725207 to 797409	72202	-	protein coding gene	zinc finger protein 1, Y-linked
Tssr164651	Y	818583 to 818633	50	+	TSS region	transcription start site region 164651
Tssr164652	Y	818646 to 818656	10	+	TSS region	transcription start site region 164652
Uba1y	Y	818649 to 844224	25575	+	protein coding gene	ubiquitin-activating enzyme, Chr Y
Gm28588	Y	841783 to 847750	5967	-	antisense lncRNA gene	predicted gene 28588
Tssr5738	Y	847748 to 847750	2	-	TSS region	transcription start site region 5738
Gm28587	Y	869709 to 873309	3600	-	lincRNA gene	predicted gene 28587
Rhoay-ps3	Y	873640 to 874215	575	+	pseudogene	ras homolog A translocated to the Y, pseudogene 3
Kdm5d	Y	897639 to 943813	46174	+	protein coding gene	lysine (K)-specific demethylase 5D
Tssr164653	Y	897782 to 897800	18	+	TSS region	transcription start site region 164653
Tssr5739	Y	903848 to 903855	7	+	TSS region	transcription start site region 5739
DYDcr1	Y	904889 to 904984	95		DNA segment	DNA Segment, Chr Y, Derry C. Roopenian 1
DYDcr2	Y	934929 to 935063	134		DNA segment	DNA Segment, Chr Y, Derry C. Roopenian 2
Tssr164654	Y	943007 to 943021	14	+	TSS region	transcription start site region 164654
n-R5s1	Y	991630 to 991748	118	-	rRNA gene	nuclear encoded rRNA 5S 1
Gm47281	Y	991657 to 991716	59	-	miRNA gene	predicted gene, 47281
Eif2s3y	Y	1010543 to 1028847	18304	+	protein coding gene	eukaryotic translation initiation factor 2, subunit 3, structural gene Y-linked
Tssr164655	Y	1010587 to 1010613	26	+	TSS region	transcription start site region 164655