Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region Y:54558340-59609035

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83 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm29305 Y 54562411 to 54565757 3346 - lincRNA gene predicted gene 29305
Gm29303 Y 54604372 to 54607612 3240 + lincRNA gene predicted gene 29303
Gm21894 Y 54656882 to 54680980 24098 + pseudogene predicted gene, 21894
Gm29307 Y 54741985 to 54742680 695 - pseudogene predicted gene 29307
Gm29557 Y 54819758 to 54820616 858 + lincRNA gene predicted gene 29557
Gm23052 Y 54928997 to 54929104 107 - rRNA gene predicted gene, 23052
Gm20927 Y 54968754 to 54969437 683 - pseudogene predicted gene, 20927
Gm20930 Y 55043309 to 55044004 695 - pseudogene predicted gene, 20930
Gm29306 Y 55072993 to 55073607 614 - pseudogene predicted gene 29306
Gm29300 Y 55109869 to 55110564 695 - pseudogene predicted gene 29300
Gm29301 Y 55151575 to 55154817 3242 + lincRNA gene predicted gene 29301
Gm20931 Y 55213720 to 55239862 26142 + protein coding gene predicted gene, 20931
Gm29559 Y 55300023 to 55300718 695 - pseudogene predicted gene 29559
Gm29558 Y 55336978 to 55337352 374 - pseudogene predicted gene 29558
Gm29555 Y 55373936 to 55377172 3236 + lincRNA gene predicted gene 29555
Gm21733 Y 55483291 to 55483986 695 - pseudogene predicted gene, 21733
Gm21330 Y 55557648 to 55558343 695 - pseudogene predicted gene, 21330
Gm28355 Y 55574640 to 55576183 1543 + lincRNA gene predicted gene 28355
Gm28354 Y 55587284 to 55587961 677 - pseudogene predicted gene 28354
Gm28353 Y 55624376 to 55624945 569 - pseudogene predicted gene 28353
Gm28352 Y 55630825 to 55634171 3346 - lincRNA gene predicted gene 28352
Gm21858 Y 55731756 to 55757908 26152 + protein coding gene predicted gene, 21858
Gm29244 Y 55767560 to 55768255 695 - pseudogene predicted gene 29244
Gm28200 Y 55796060 to 55796374 314 - pseudogene predicted gene 28200
Gm28201 Y 55797791 to 55801133 3342 - lincRNA gene predicted gene 28201
Gm28202 Y 55833464 to 55836360 2896 + lincRNA gene predicted gene 28202
Gm28203 Y 55943933 to 55944627 694 - pseudogene predicted gene 28203
Gm21340 Y 56018223 to 56018918 695 - pseudogene predicted gene, 21340
Gm28204 Y 56047994 to 56048607 613 - pseudogene predicted gene 28204
Gm28205 Y 56084836 to 56085532 696 - pseudogene predicted gene 28205
Gm28206 Y 56091402 to 56094749 3347 - lincRNA gene predicted gene 28206
Gm28207 Y 56125273 to 56128511 3238 + lincRNA gene predicted gene 28207
Gm28208 Y 56166623 to 56169519 2896 + lincRNA gene predicted gene 28208
Gm21851 Y 56249458 to 56250153 695 - pseudogene predicted gene, 21851
Gm21819 Y 56323625 to 56324320 695 - pseudogene predicted gene, 21819
Gm29224 Y 56353334 to 56353948 614 - pseudogene predicted gene 29224
Gm29223 Y 56390152 to 56390846 694 - pseudogene predicted gene 29223
Gm29222 Y 56396951 to 56400297 3346 - lincRNA gene predicted gene 29222
Gm29221 Y 56420276 to 56429767 9491 + lincRNA gene predicted gene 29221
Gm29220 Y 56438870 to 56442111 3241 + lincRNA gene predicted gene 29220
Gm21815 Y 56502245 to 56526833 24588 + pseudogene predicted gene, 21815
Gm29407 Y 56725602 to 56726297 695 - pseudogene predicted gene 29407
Gm29405 Y 56803398 to 56804256 858 + lincRNA gene predicted gene 29405
Gm29406 Y 56941294 to 56942627 1333 - lincRNA gene predicted gene 29406
Gm20913 Y 57016825 to 57017520 695 - pseudogene predicted gene, 20913
Gm29404 Y 57033825 to 57035409 1584 + lincRNA gene predicted gene 29404
Gm29403 Y 57046538 to 57047152 614 - pseudogene predicted gene 29403
Gm28350 Y 57083340 to 57084035 695 - pseudogene predicted gene 28350
Gm28964 Y 57125046 to 57128288 3242 + lincRNA gene predicted gene 28964
Sly Y 57187206 to 57213358 26152 + protein coding gene Sycp3 like Y-linked
Gm28165 Y 57273550 to 57274243 693 - pseudogene predicted gene 28165
Gm28709 Y 57343729 to 57354175 10446 - lincRNA gene predicted gene 28709
Gm28965 Y 57347488 to 57350727 3239 + lincRNA gene predicted gene 28965
Gm21868 Y 57457146 to 57459489 2343 - pseudogene predicted gene, 21868
Gm21943 Y 57531417 to 57533726 2309 - protein coding gene predicted gene, 21943
Gm28532 Y 57559217 to 57563464 4247 - lincRNA gene predicted gene 28532
Gm28533 Y 57598047 to 57600691 2644 - pseudogene predicted gene 28533
Gm28966 Y 57643572 to 57646813 3241 + lincRNA gene predicted gene 28966
Gm28961 Y 57705697 to 57731932 26235 + protein coding gene predicted gene 28961
Gm28962 Y 57821935 to 57824297 2362 - lincRNA gene predicted gene 28962
Gm28963 Y 57850477 to 57853710 3233 - lincRNA gene predicted gene 28963
Tssr5749 Y 57896497 to 57896522 25 + TSS region transcription start site region 5749
Tssr5750 Y 57896554 to 57896590 36 - TSS region transcription start site region 5750
Gm29466 Y 58047925 to 58048452 527 - lincRNA gene predicted gene 29466
Gm29467 Y 58080000 to 58082699 2699 - lincRNA gene predicted gene 29467
Gm21724 Y 58368835 to 58369530 695 - pseudogene predicted gene, 21724
Gm20963 Y 58404476 to 58405003 527 + lincRNA gene predicted gene, 20963
Gm28326 Y 58427109 to 58429470 2361 + lincRNA gene predicted gene 28326
Gm28325 Y 58491793 to 58494156 2363 + lincRNA gene predicted gene 28325
Gm21405 Y 58574464 to 58599040 24576 + pseudogene predicted gene, 21405
Gm28284 Y 58688586 to 58691821 3235 - lincRNA gene predicted gene 28284
Gm29368 Y 58717540 to 58720772 3232 - lincRNA gene predicted gene 29368
Gm21861 Y 58801702 to 58814582 12880 - protein coding gene predicted gene, 21861
Gm21413 Y 58914727 to 58915254 527 - lincRNA gene predicted gene, 21413
Gm28073 Y 58956281 to 58958645 2364 - lincRNA gene predicted gene 28073
Gm21419 Y 58980963 to 58981489 526 - lincRNA gene predicted gene, 21419
Gm28074 Y 59022160 to 59025399 3239 - lincRNA gene predicted gene 28074
Gm21428 Y 59047279 to 59047806 527 - lincRNA gene predicted gene, 21428
Gm28072 Y 59085108 to 59087386 2278 - unclassified non-coding RNA gene predicted gene 28072
Gm21758 Y 59395280 to 59408253 12973 + pseudogene predicted gene, 21758
Gm29672 Y 59489253 to 59492035 2782 + lincRNA gene predicted gene 29672
Gm29131 Y 59517690 to 59520925 3235 + lincRNA gene predicted gene 29131
Gm20871 Y 59606710 to 59632758 26048 - pseudogene predicted gene, 20871