Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region Y:3893359-6604441

Filter by:
84 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm28413 Y 3905027 to 3905317 290 + pseudogene predicted gene 28413
Gm28412 Y 3909381 to 3909557 176 + pseudogene predicted gene 28412
Gm8525 Y 3948853 to 3949713 860 - pseudogene predicted gene 8525
Gm28414 Y 3950043 to 3950336 293 - pseudogene predicted gene 28414
Gm28648 Y 3968870 to 3983656 14786 + pseudogene predicted gene 28648
Gm28647 Y 3986025 to 3986221 196 - pseudogene predicted gene 28647
Gm29435 Y 3991193 to 3991881 688 - pseudogene predicted gene 29435
Vmn2r-ps139 Y 4005164 to 4016574 11410 + pseudogene vomeronasal 2, receptor, pseudogene 139
Vmn2r-ps140 Y 4020674 to 4021117 443 + pseudogene vomeronasal 2, receptor, pseudogene 140
Gm29038 Y 4164028 to 4164705 677 - pseudogene predicted gene 29038
Cpgi23084 Y 4164074 to 4165398 1324 CpG island CpG island 23084
Tssr164742 Y 4166228 to 4166287 59 - TSS region transcription start site region 164742
Tssr164743 Y 4166289 to 4166292 3 - TSS region transcription start site region 164743
Cpgi23086 Y 4167149 to 4167444 295 CpG island CpG island 23086
Tssr164672 Y 4167828 to 4167868 40 - TSS region transcription start site region 164672
Cpgi23116 Y 4181815 to 4182073 258 CpG island CpG island 23116
Tssr164739 Y 4185590 to 4185601 11 + TSS region transcription start site region 164739
Cpgi23113 Y 4185793 to 4186166 373 CpG island CpG island 23113
Tssr164744 Y 4193991 to 4193995 4 - TSS region transcription start site region 164744
Cpgi23110 Y 4195883 to 4196621 738 CpG island CpG island 23110
Cpgi23105 Y 4202765 to 4203221 456 CpG island CpG island 23105
Tssr164745 Y 4207239 to 4207265 26 - TSS region transcription start site region 164745
Cpgi23103 Y 4211225 to 4211587 362 CpG island CpG island 23103
Tssr164746 Y 4225995 to 4226013 18 - TSS region transcription start site region 164746
Tssr164747 Y 4226100 to 4226106 6 - TSS region transcription start site region 164747
Tssr164740 Y 4226117 to 4226135 18 + TSS region transcription start site region 164740
Tssr164741 Y 4226568 to 4226605 37 + TSS region transcription start site region 164741
Tssr164748 Y 4227178 to 4227185 7 - TSS region transcription start site region 164748
Gm28191 Y 4227580 to 4239057 11477 + pseudogene predicted gene 28191
Gm28186 Y 4311904 to 4312582 678 - pseudogene predicted gene 28186
Gm21064 Y 4341127 to 4381724 40597 + pseudogene predicted gene, 21064
Tssr5741 Y 4453590 to 4453600 10 + TSS region transcription start site region 5741
Tssr5742 Y 4453623 to 4453626 3 - TSS region transcription start site region 5742
Gm28241 Y 4531045 to 4531637 592 + pseudogene predicted gene 28241
Gm28242 Y 4586871 to 4590103 3232 + lincRNA gene predicted gene 28242
Gm37222 Y 4666848 to 4669808 2960 + unclassified gene predicted gene, 37222
Gm28356 Y 4768840 to 4794934 26094 - pseudogene predicted gene 28356
Gm28357 Y 4885200 to 4887558 2358 - lincRNA gene predicted gene 28357
Gm29352 Y 4892859 to 4893402 543 - pseudogene predicted gene 29352
Gm29351 Y 4903523 to 4904050 527 - lincRNA gene predicted gene 29351
Tssr5743 Y 4927922 to 4927923 1 - TSS region transcription start site region 5743
Gm29350 Y 4940856 to 4941396 540 - pseudogene predicted gene 29350
Gm29349 Y 4951400 to 4951897 497 - lincRNA gene predicted gene 29349
Gm29355 Y 5002140 to 5002836 696 + pseudogene predicted gene 29355
Gm20918 Y 5045445 to 5046128 683 + protein coding gene predicted gene, 20918
Gm29354 Y 5146887 to 5147582 695 + pseudogene predicted gene 29354
Gm29353 Y 5235231 to 5237553 2322 - lincRNA gene predicted gene 29353
Gm21820 Y 5248359 to 5249441 1082 - pseudogene predicted gene, 21820
Gm29357 Y 5286082 to 5286779 697 + pseudogene predicted gene 29357
Gm29356 Y 5320598 to 5320970 372 + pseudogene predicted gene 29356
Gm29161 Y 5340177 to 5340875 698 + pseudogene predicted gene 29161
Gm28767 Y 5383039 to 5383152 113 + pseudogene predicted gene 28767
Gm29160 Y 5391538 to 5392236 698 + pseudogene predicted gene 29160
Gm20915 Y 5440160 to 5460208 20048 - pseudogene predicted gene, 20915
Gm28766 Y 5465722 to 5465955 233 + pseudogene predicted gene 28766
Gm29159 Y 5472490 to 5472868 378 - pseudogene predicted gene 29159
Gm27663 Y 5542752 to 5542861 109 + miRNA gene predicted gene, 27663
Gm29158 Y 5617083 to 5620317 3234 - lincRNA gene predicted gene 29158
Gm21854 Y 5656986 to 5659574 2588 + protein coding gene predicted gene, 21854
Gm28768 Y 5682517 to 5682894 377 + pseudogene predicted gene 28768
Gm28769 Y 5695785 to 5696399 614 + pseudogene predicted gene 28769
Gm20914 Y 5727496 to 5728179 683 + protein coding gene predicted gene, 20914
Gm28171 Y 5793395 to 5795728 2333 + protein coding gene predicted gene 28171
Gm28173 Y 5899578 to 5902813 3235 - lincRNA gene predicted gene 28173
Gm37236 Y 5912031 to 5915279 3248 - unclassified gene predicted gene, 37236
Gm29194 Y 5934890 to 5938242 3352 + lincRNA gene predicted gene 29194
Gm21778 Y 5942460 to 5945031 2571 + protein coding gene predicted gene, 21778
Gm29195 Y 5973657 to 5974035 378 + pseudogene predicted gene 29195
Gm29196 Y 5986815 to 5987432 617 + pseudogene predicted gene 29196
Gm28435 Y 5998624 to 5998731 107 - pseudogene predicted gene 28435
Gm28436 Y 6018394 to 6019091 697 + pseudogene predicted gene 28436
Gm29197 Y 6084520 to 6085221 701 + pseudogene predicted gene 29197
Gm29198 Y 6198427 to 6201677 3250 - lincRNA gene predicted gene 29198
Gm29193 Y 6220975 to 6246362 25387 + lincRNA gene predicted gene 29193
Gm28430 Y 6224822 to 6227191 2369 - lincRNA gene predicted gene 28430
Gm21746 Y 6237453 to 6237995 542 - protein coding gene predicted gene, 21746
Gm28593 Y 6259341 to 6262689 3348 + lincRNA gene predicted gene 28593
Gm20873 Y 6268725 to 6269542 817 + protein coding gene predicted gene, 20873
Gm28916 Y 6305733 to 6306431 698 + pseudogene predicted gene 28916
Gm28915 Y 6368874 to 6369572 698 - pseudogene predicted gene 28915
Tssr5744 Y 6446584 to 6446585 1 - TSS region transcription start site region 5744
Gm28918 Y 6454156 to 6454854 698 - pseudogene predicted gene 28918
Gm28917 Y 6576815 to 6577051 236 - pseudogene predicted gene 28917
Gm28919 Y 6583546 to 6615511 31965 + protein coding gene predicted gene 28919