Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region Y:3254028-5074705

Filter by:
62 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm21677 Y 3294976 to 3306449 11473 - protein coding gene predicted gene, 21677
Gm29288 Y 3310714 to 3311614 900 + pseudogene predicted gene 29288
Gm21133 Y 3310714 to 3311701 987 - pseudogene predicted gene, 21133
Gm21693 Y 3326750 to 3345329 18579 - protein coding gene predicted gene, 21693
Gm21139 Y 3349656 to 3350532 876 - pseudogene predicted gene, 21139
Gm21704 Y 3367143 to 3378783 11640 - protein coding gene predicted gene, 21704
Gm21147 Y 3383123 to 3384035 912 - pseudogene predicted gene, 21147
Gm21708 Y 3399188 to 3410167 10979 - protein coding gene predicted gene, 21708
Gm21156 Y 3414421 to 3415289 868 - pseudogene predicted gene, 21156
Rhoay-ps2 Y 3747151 to 3747731 580 - pseudogene ras homolog A translocated to the Y, pseudogene 2
Gm2316 Y 3766452 to 3767296 844 + pseudogene predicted gene 2316
Gm3376 Y 3771673 to 3783267 11594 + protein coding gene predicted gene 3376
Gm2325 Y 3804121 to 3804701 580 - pseudogene predicted gene 2325
Gm28649 Y 3846545 to 3853545 7000 - pseudogene predicted gene 28649
Gm8521 Y 3859067 to 3859672 605 + pseudogene predicted gene 8521
Gm18177 Y 3875525 to 3875928 403 - pseudogene predicted gene, 18177
Gm28429 Y 3886204 to 3886566 362 + pseudogene predicted gene 28429
Gm28413 Y 3905027 to 3905317 290 + pseudogene predicted gene 28413
Gm28412 Y 3909381 to 3909557 176 + pseudogene predicted gene 28412
Gm8525 Y 3948853 to 3949713 860 - pseudogene predicted gene 8525
Gm28414 Y 3950043 to 3950336 293 - pseudogene predicted gene 28414
Gm28648 Y 3968870 to 3983656 14786 + pseudogene predicted gene 28648
Gm28647 Y 3986025 to 3986221 196 - pseudogene predicted gene 28647
Gm29435 Y 3991193 to 3991881 688 - pseudogene predicted gene 29435
Vmn2r-ps139 Y 4005164 to 4016574 11410 + pseudogene vomeronasal 2, receptor, pseudogene 139
Vmn2r-ps140 Y 4020674 to 4021117 443 + pseudogene vomeronasal 2, receptor, pseudogene 140
Gm29038 Y 4164028 to 4164705 677 - pseudogene predicted gene 29038
Cpgi23084 Y 4164074 to 4165398 1324 CpG island CpG island 23084
Tssr164742 Y 4166228 to 4166287 59 - TSS region transcription start site region 164742
Tssr164743 Y 4166289 to 4166292 3 - TSS region transcription start site region 164743
Cpgi23086 Y 4167149 to 4167444 295 CpG island CpG island 23086
Tssr164672 Y 4167828 to 4167868 40 - TSS region transcription start site region 164672
Cpgi23116 Y 4181815 to 4182073 258 CpG island CpG island 23116
Tssr164739 Y 4185590 to 4185601 11 + TSS region transcription start site region 164739
Cpgi23113 Y 4185793 to 4186166 373 CpG island CpG island 23113
Tssr164744 Y 4193991 to 4193995 4 - TSS region transcription start site region 164744
Cpgi23110 Y 4195883 to 4196621 738 CpG island CpG island 23110
Cpgi23105 Y 4202765 to 4203221 456 CpG island CpG island 23105
Tssr164745 Y 4207239 to 4207265 26 - TSS region transcription start site region 164745
Cpgi23103 Y 4211225 to 4211587 362 CpG island CpG island 23103
Tssr164746 Y 4225995 to 4226013 18 - TSS region transcription start site region 164746
Tssr164747 Y 4226100 to 4226106 6 - TSS region transcription start site region 164747
Tssr164740 Y 4226117 to 4226135 18 + TSS region transcription start site region 164740
Tssr164741 Y 4226568 to 4226605 37 + TSS region transcription start site region 164741
Tssr164748 Y 4227178 to 4227185 7 - TSS region transcription start site region 164748
Gm28191 Y 4227580 to 4239057 11477 + pseudogene predicted gene 28191
Gm28186 Y 4311904 to 4312582 678 - pseudogene predicted gene 28186
Gm21064 Y 4341127 to 4381724 40597 + pseudogene predicted gene, 21064
Tssr5741 Y 4453590 to 4453600 10 + TSS region transcription start site region 5741
Tssr5742 Y 4453623 to 4453626 3 - TSS region transcription start site region 5742
Gm28241 Y 4531045 to 4531637 592 + pseudogene predicted gene 28241
Gm28242 Y 4586871 to 4590103 3232 + lincRNA gene predicted gene 28242
Gm37222 Y 4666848 to 4669808 2960 + unclassified gene predicted gene, 37222
Gm28356 Y 4768840 to 4794934 26094 - pseudogene predicted gene 28356
Gm28357 Y 4885200 to 4887558 2358 - lincRNA gene predicted gene 28357
Gm29352 Y 4892859 to 4893402 543 - pseudogene predicted gene 29352
Gm29351 Y 4903523 to 4904050 527 - lincRNA gene predicted gene 29351
Tssr5743 Y 4927922 to 4927923 1 - TSS region transcription start site region 5743
Gm29350 Y 4940856 to 4941396 540 - pseudogene predicted gene 29350
Gm29349 Y 4951400 to 4951897 497 - lincRNA gene predicted gene 29349
Gm29355 Y 5002140 to 5002836 696 + pseudogene predicted gene 29355
Gm20918 Y 5045445 to 5046128 683 + protein coding gene predicted gene, 20918