Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region Y:2465714-4156701

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48 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr164659 Y 2519485 to 2519494 9 + TSS region transcription start site region 164659
Vmn2r-ps137 Y 2529348 to 2532653 3305 + pseudogene vomeronasal 2, receptor, pseudogene 137
Cpgi23079 Y 2532347 to 2532607 260 CpG island CpG island 23079
Vmn2r-ps138 Y 2535822 to 2535962 140 + pseudogene vomeronasal 2, receptor, pseudogene 138
Gm28630 Y 2552500 to 2552997 497 + pseudogene predicted gene 28630
Gm28629 Y 2597674 to 2597936 262 + pseudogene predicted gene 28629
H2al2c Y 2599099 to 2599434 335 + protein coding gene H2A histone family member L2C
Uba1y-ps1 Y 2637211 to 2647300 10089 - pseudogene ubiquitin-activating enzyme, Chr Y, pseudogene 1
Sry Y 2662471 to 2663658 1187 - protein coding gene sex determining region of Chr Y
Gm18798 Y 2679239 to 2689042 9803 + pseudogene predicted gene, 18798
H2al2b Y 2720339 to 2720674 335 - protein coding gene H2A histone family member L2B
Gm28628 Y 2721836 to 2722099 263 - pseudogene predicted gene 28628
Gm4064 Y 2785165 to 2796205 11040 - protein coding gene predicted gene 4064
Gm6137 Y 2806115 to 2806692 577 - pseudogene predicted gene 6137
Gm8498 Y 2825380 to 2826353 973 + pseudogene predicted gene 8498
Rbmy Y 2830680 to 2841854 11174 + protein coding gene RNA binding motif protein, Y chromosome
Gm8502 Y 2856974 to 2857874 900 + pseudogene predicted gene 8502
Gm10256 Y 2862139 to 2873496 11357 + protein coding gene predicted gene 10256
Gm8506 Y 2895798 to 2896626 828 + pseudogene predicted gene 8506
Gm10352 Y 2900989 to 2912206 11217 + protein coding gene predicted gene 10352
Gm8510 Y 2927358 to 2928252 894 + pseudogene predicted gene 8510
Gm29289 Y 2932582 to 2939416 6834 + protein coding gene predicted gene 29289
Gm21677 Y 3294976 to 3306449 11473 - protein coding gene predicted gene, 21677
Gm29288 Y 3310714 to 3311614 900 + pseudogene predicted gene 29288
Gm21133 Y 3310714 to 3311701 987 - pseudogene predicted gene, 21133
Gm21693 Y 3326750 to 3345329 18579 - protein coding gene predicted gene, 21693
Gm21139 Y 3349656 to 3350532 876 - pseudogene predicted gene, 21139
Gm21704 Y 3367143 to 3378783 11640 - protein coding gene predicted gene, 21704
Gm21147 Y 3383123 to 3384035 912 - pseudogene predicted gene, 21147
Gm21708 Y 3399188 to 3410167 10979 - protein coding gene predicted gene, 21708
Gm21156 Y 3414421 to 3415289 868 - pseudogene predicted gene, 21156
Rhoay-ps2 Y 3747151 to 3747731 580 - pseudogene ras homolog A translocated to the Y, pseudogene 2
Gm2316 Y 3766452 to 3767296 844 + pseudogene predicted gene 2316
Gm3376 Y 3771673 to 3783267 11594 + protein coding gene predicted gene 3376
Gm2325 Y 3804121 to 3804701 580 - pseudogene predicted gene 2325
Gm28649 Y 3846545 to 3853545 7000 - pseudogene predicted gene 28649
Gm8521 Y 3859067 to 3859672 605 + pseudogene predicted gene 8521
Gm18177 Y 3875525 to 3875928 403 - pseudogene predicted gene, 18177
Gm28429 Y 3886204 to 3886566 362 + pseudogene predicted gene 28429
Gm28413 Y 3905027 to 3905317 290 + pseudogene predicted gene 28413
Gm28412 Y 3909381 to 3909557 176 + pseudogene predicted gene 28412
Gm8525 Y 3948853 to 3949713 860 - pseudogene predicted gene 8525
Gm28414 Y 3950043 to 3950336 293 - pseudogene predicted gene 28414
Gm28648 Y 3968870 to 3983656 14786 + pseudogene predicted gene 28648
Gm28647 Y 3986025 to 3986221 196 - pseudogene predicted gene 28647
Gm29435 Y 3991193 to 3991881 688 - pseudogene predicted gene 29435
Vmn2r-ps139 Y 4005164 to 4016574 11410 + pseudogene vomeronasal 2, receptor, pseudogene 139
Vmn2r-ps140 Y 4020674 to 4021117 443 + pseudogene vomeronasal 2, receptor, pseudogene 140