MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region Y:1175753-1315766

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Uty	Y	1096861 to 1245759	148898	-	protein coding gene	ubiquitously transcribed tetratricopeptide repeat gene, Y chromosome
Tssr164661	Y	1197438 to 1197452	14	-	TSS region	transcription start site region 164661
Tssr164662	Y	1245655 to 1245676	21	-	TSS region	transcription start site region 164662
Tssr164663	Y	1245685 to 1245752	67	-	TSS region	transcription start site region 164663
Tssr164664	Y	1245753 to 1245766	13	-	TSS region	transcription start site region 164664
Ddx3y	Y	1260771 to 1286629	25858	-	protein coding gene	DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked
Gm4017	Y	1268548 to 1268885	337	-	pseudogene	predicted gene 4017
Tssr164665	Y	1270621 to 1270625	4	-	TSS region	transcription start site region 164665
Gm18665	Y	1277313 to 1277582	269	-	pseudogene	predicted gene, 18665
Cpgi23077	Y	1286393 to 1286737	344		CpG island	CpG island 23077
Tssr164666	Y	1286429 to 1286437	8	-	TSS region	transcription start site region 164666
Tssr5740	Y	1286496 to 1286501	5	-	TSS region	transcription start site region 5740
Tssr164667	Y	1286517 to 1286548	31	-	TSS region	transcription start site region 164667
Tssr164668	Y	1286563 to 1286615	52	-	TSS region	transcription start site region 164668
Tssr164669	Y	1286623 to 1286635	12	-	TSS region	transcription start site region 164669
Gm5377	Y	1291007 to 1294821	3814	+	pseudogene	predicted gene 5377
Usp9y	Y	1298961 to 1459782	160821	-	protein coding gene	ubiquitin specific peptidase 9, Y chromosome
Gm25565	Y	1308273 to 1308377	104	-	snRNA gene	predicted gene, 25565