Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:99466327-100486597

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pja1 X 99465734 to 99471268 5534 - protein coding gene praja ring finger ubiquitin ligase 1
Tssr163843 X 99467384 to 99467395 11 - TSS region transcription start site region 163843
Cpgi22852 X 99469679 to 99470088 409 CpG island CpG island 22852
Cpgi22853 X 99470343 to 99470871 528 CpG island CpG island 22853
Tssr163844 X 99470676 to 99470748 72 - TSS region transcription start site region 163844
Tssr5652 X 99542658 to 99542663 5 + TSS region transcription start site region 5652
Gm31155 X 99557333 to 99562946 5613 + lncRNA gene predicted gene, 31155
Gm14816 X 99687481 to 99687774 293 - pseudogene predicted gene 14816
Gm41898 X 99711306 to 99730825 19519 + lncRNA gene predicted gene, 41898
Pcna-ps1 X 99796471 to 99797663 1192 + pseudogene proliferating cell nuclear antigen pseudogene 1
Cpgi22854 X 99819701 to 99821825 2124 CpG island CpG island 22854
Tssr161604 X 99820158 to 99820171 13 + TSS region transcription start site region 161604
Tssr161605 X 99820183 to 99820200 17 + TSS region transcription start site region 161605
Tmem28 X 99821069 to 99846345 25276 + protein coding gene transmembrane protein 28
DXDcr3 X 99824922 to 99825017 95 DNA segment DNA Segment, Chr X, Derry C. Roopenian 3
Cpgi22855 X 99853308 to 99853541 233 CpG island CpG island 22855
Cpgi22856 X 99975479 to 99976092 613 CpG island CpG island 22856
Tssr161606 X 99975570 to 99975649 79 + TSS region transcription start site region 161606
Cpgi22857 X 99976327 to 99976597 270 CpG island CpG island 22857
Gm14832 X 100156635 to 100156956 321 + pseudogene predicted gene 14832
Gm14829 X 100329692 to 100330828 1136 + pseudogene predicted gene 14829
Gm14828 X 100337514 to 100338665 1151 + pseudogene predicted gene 14828
Mir676 X 100381097 to 100381185 88 + miRNA gene microRNA 676
Eda X 100400760 to 99975606 -425154 + protein coding gene ectodysplasin-A
Awat2 X 100402221 to 100442717 40496 - protein coding gene acyl-CoA wax alcohol acyltransferase 2
Tssr163845 X 100412591 to 100412606 15 - TSS region transcription start site region 163845
Tssr161607 X 100428906 to 100428912 6 + TSS region transcription start site region 161607
Otud6a X 100429013 to 100429885 872 + protein coding gene OTU domain containing 6A
Cpgi22858 X 100429042 to 100429933 891 CpG island CpG island 22858