Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:99040676-99900748

Filter by:
42 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Stard8 X 99003248 to 99074728 71480 + protein coding gene START domain containing 8
Cpgi22849 X 99042600 to 99043134 534 CpG island CpG island 22849
Tssr161595 X 99042604 to 99042613 9 + TSS region transcription start site region 161595
Tssr161596 X 99042620 to 99042661 41 + TSS region transcription start site region 161596
Tssr161597 X 99042989 to 99043017 28 + TSS region transcription start site region 161597
Tssr161598 X 99044003 to 99044016 13 + TSS region transcription start site region 161598
Gm5760 X 99081401 to 99082402 1001 - pseudogene predicted gene 5760
Cpgi22850 X 99135690 to 99137244 1554 CpG island CpG island 22850
Tssr163842 X 99135946 to 99135950 4 - TSS region transcription start site region 163842
Tssr161599 X 99136073 to 99136084 11 + TSS region transcription start site region 161599
Tssr161600 X 99136090 to 99136107 17 + TSS region transcription start site region 161600
Tssr161601 X 99136119 to 99136138 19 + TSS region transcription start site region 161601
Efnb1 X 99136130 to 99148991 12861 + protein coding gene ephrin B1
Tssr161602 X 99136180 to 99136183 3 + TSS region transcription start site region 161602
Tssr161603 X 99147573 to 99147592 19 + TSS region transcription start site region 161603
Gm46674 X 99198691 to 99203088 4397 + lncRNA gene predicted gene, 46674
Cpgi22851 X 99216478 to 99217345 867 CpG island CpG island 22851
DXMit96 X 99231474 to 99231566 92 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 96
Gm39528 X 99287089 to 99320843 33754 + lncRNA gene predicted gene, 39528
Gm30649 X 99288557 to 99291600 3043 - lncRNA gene predicted gene, 30649
Gm30704 X 99330146 to 99334710 4564 - lncRNA gene predicted gene, 30704
Gm14812 X 99405331 to 99443797 38466 - lincRNA gene predicted gene 14812
Gm14809 X 99407579 to 99414219 6640 - lincRNA gene predicted gene 14809
Gm30798 X 99454173 to 99457728 3555 + lncRNA gene predicted gene, 30798
Gm14808 X 99459025 to 99460753 1728 + antisense lncRNA gene predicted gene 14808
Tssr5651 X 99459051 to 99459061 10 + TSS region transcription start site region 5651
Pja1 X 99465734 to 99471268 5534 - protein coding gene praja ring finger ubiquitin ligase 1
Tssr163843 X 99467384 to 99467395 11 - TSS region transcription start site region 163843
Cpgi22852 X 99469679 to 99470088 409 CpG island CpG island 22852
Cpgi22853 X 99470343 to 99470871 528 CpG island CpG island 22853
Tssr163844 X 99470676 to 99470748 72 - TSS region transcription start site region 163844
Tssr5652 X 99542658 to 99542663 5 + TSS region transcription start site region 5652
Gm31155 X 99557333 to 99562946 5613 + lncRNA gene predicted gene, 31155
Gm14816 X 99687481 to 99687774 293 - pseudogene predicted gene 14816
Gm41898 X 99711306 to 99730825 19519 + lncRNA gene predicted gene, 41898
Pcna-ps1 X 99796471 to 99797663 1192 + pseudogene proliferating cell nuclear antigen pseudogene 1
Cpgi22854 X 99819701 to 99821825 2124 CpG island CpG island 22854
Tssr161604 X 99820158 to 99820171 13 + TSS region transcription start site region 161604
Tssr161605 X 99820183 to 99820200 17 + TSS region transcription start site region 161605
Tmem28 X 99821069 to 99846345 25276 + protein coding gene transmembrane protein 28
DXDcr3 X 99824922 to 99825017 95 DNA segment DNA Segment, Chr X, Derry C. Roopenian 3
Cpgi22855 X 99853308 to 99853541 233 CpG island CpG island 22855