Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:9761788-10262679

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21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr160528 X 9846945 to 9846977 32 + TSS region transcription start site region 160528
Hypm X 9846947 to 9847500 553 + protein coding gene huntingtin interacting protein M
H2al3 X 9849703 to 9850252 549 + protein coding gene H2A histone family member L3
Tssr160529 X 9849707 to 9849710 3 + TSS region transcription start site region 160529
Tssr5590 X 9862099 to 9862115 16 + TSS region transcription start site region 5590
Tssr160530 X 9862130 to 9862143 13 + TSS region transcription start site region 160530
Sytl5 X 9885622 to 9994543 108921 + protein coding gene synaptotagmin-like 5
Gm39493 X 9933835 to 9939308 5473 - lncRNA gene predicted gene, 39493
Gm5754 X 10011788 to 10012679 891 + pseudogene predicted gene 5754
Srpx X 10037977 to 10117661 79684 - protein coding gene sushi-repeat-containing protein
Tssr162976 X 10117597 to 10117677 80 - TSS region transcription start site region 162976
Gm33844 X 10117838 to 10120004 2166 + lncRNA gene predicted gene, 33844
Rpgr X 10158216 to 10216795 58579 - protein coding gene retinitis pigmentosa GTPase regulator
Tssr162977 X 10216437 to 10216482 45 - TSS region transcription start site region 162977
Cpgi22600 X 10216460 to 10216967 507 CpG island CpG island 22600
Tssr162978 X 10216685 to 10216765 80 - TSS region transcription start site region 162978
Tssr162979 X 10216918 to 10216921 3 - TSS region transcription start site region 162979
Otc X 10252305 to 10321024 68719 + protein coding gene ornithine transcarbamylase
Tssr160531 X 10252334 to 10252357 23 + TSS region transcription start site region 160531
Tssr160532 X 10252361 to 10252383 22 + TSS region transcription start site region 160532
Tssr160533 X 10254419 to 10254420 1 + TSS region transcription start site region 160533