Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:96256832-97701054

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43 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Vsig4 X 96247203 to 96293438 46235 - protein coding gene V-set and immunoglobulin domain containing 4
Tssr163821 X 96293425 to 96293453 28 - TSS region transcription start site region 163821
Tssr163822 X 96293456 to 96293465 9 - TSS region transcription start site region 163822
Hsf3 X 96306178 to 96456294 150116 - protein coding gene heat shock transcription factor 3
Gm18171 X 96308355 to 96309014 659 - pseudogene predicted gene, 18171
Tssr161568 X 96334327 to 96334349 22 + TSS region transcription start site region 161568
Tssr161569 X 96341733 to 96341742 9 + TSS region transcription start site region 161569
Gm14933 X 96358727 to 96359681 954 - pseudogene predicted gene 14933
Tssr161570 X 96455397 to 96455411 14 + TSS region transcription start site region 161570
Tssr161571 X 96455412 to 96455450 38 + TSS region transcription start site region 161571
Heph X 96455436 to 96574485 119049 + protein coding gene hephaestin
Tssr161572 X 96455496 to 96455497 1 + TSS region transcription start site region 161572
Tssr5650 X 96455502 to 96455505 3 + TSS region transcription start site region 5650
Tssr161573 X 96455511 to 96455522 11 + TSS region transcription start site region 161573
Tssr161574 X 96455529 to 96455599 70 + TSS region transcription start site region 161574
Tssr161575 X 96455612 to 96455636 24 + TSS region transcription start site region 161575
Tssr161576 X 96456344 to 96456356 12 + TSS region transcription start site region 161576
Tssr161577 X 96456362 to 96456388 26 + TSS region transcription start site region 161577
Tssr161578 X 96456404 to 96456441 37 + TSS region transcription start site region 161578
Tssr161579 X 96456490 to 96456502 12 + TSS region transcription start site region 161579
Rpl17-ps8 X 96484859 to 96485479 620 + pseudogene ribosomal protein L17, pseudogene 8
Gm14935 X 96548629 to 96550333 1704 + pseudogene predicted gene 14935
Tssr161580 X 96713459 to 96713475 16 + TSS region transcription start site region 161580
Gpr165 X 96713468 to 96719388 5920 + protein coding gene G protein-coupled receptor 165
Tssr161581 X 96713486 to 96713497 11 + TSS region transcription start site region 161581
Tssr161582 X 96713508 to 96713520 12 + TSS region transcription start site region 161582
Tssr161583 X 96713547 to 96713554 7 + TSS region transcription start site region 161583
Gm16394 X 96885509 to 96887873 2364 - pseudogene predicted gene 16394
1700125M20Rik X 96934091 to 96934660 569 unclassified gene RIKEN cDNA 1700125M20 gene
Gm14803 X 96934690 to 96935224 534 - pseudogene predicted gene 14803
Tssr163823 X 96935244 to 96935250 6 - TSS region transcription start site region 163823
Gm9059 X 96966257 to 96966648 391 - pseudogene predicted gene 9059
Gm39527 X 96966832 to 96991054 24222 + lncRNA gene predicted gene, 39527
Gm9060 X 97047716 to 97048511 795 - pseudogene predicted gene 9060
Pgr15l X 97072596 to 97082104 9508 + protein coding gene G protein-coupled receptor 15-like
Gm14800 X 97161655 to 97162689 1034 - pseudogene predicted gene 14800
Eda2r X 97333840 to 97377216 43376 - protein coding gene ectodysplasin A2 receptor
Gm18111 X 97365500 to 97366173 673 + pseudogene predicted gene, 18111
Tssr163824 X 97376456 to 97376465 9 - TSS region transcription start site region 163824
Tssr163825 X 97376494 to 97376508 14 - TSS region transcription start site region 163825
Tssr163826 X 97377163 to 97377187 24 - TSS region transcription start site region 163826
Tssr163827 X 97377190 to 97377195 5 - TSS region transcription start site region 163827
Tssr161584 X 97526986 to 97526987 1 + TSS region transcription start site region 161584