Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:96226178-96536294

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30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
F630028O10Rik X 96239926 to 96243636 3710 + antisense lncRNA gene RIKEN cDNA F630028O10 gene
Tssr161561 X 96239935 to 96239948 13 + TSS region transcription start site region 161561
Tssr161562 X 96240489 to 96240491 2 + TSS region transcription start site region 161562
Mir223 X 96242817 to 96242926 109 + miRNA gene microRNA 223
Tssr161563 X 96242906 to 96242911 5 + TSS region transcription start site region 161563
Vsig4 X 96247203 to 96293438 46235 - protein coding gene V-set and immunoglobulin domain containing 4
Tssr161564 X 96255554 to 96255565 11 + TSS region transcription start site region 161564
Tssr161565 X 96255571 to 96255601 30 + TSS region transcription start site region 161565
Tssr161566 X 96255603 to 96255694 91 + TSS region transcription start site region 161566
Tssr161567 X 96255712 to 96255721 9 + TSS region transcription start site region 161567
Tssr163821 X 96293425 to 96293453 28 - TSS region transcription start site region 163821
Tssr163822 X 96293456 to 96293465 9 - TSS region transcription start site region 163822
Hsf3 X 96306178 to 96456294 150116 - protein coding gene heat shock transcription factor 3
Gm18171 X 96308355 to 96309014 659 - pseudogene predicted gene, 18171
Tssr161568 X 96334327 to 96334349 22 + TSS region transcription start site region 161568
Tssr161569 X 96341733 to 96341742 9 + TSS region transcription start site region 161569
Gm14933 X 96358727 to 96359681 954 - pseudogene predicted gene 14933
Tssr161570 X 96455397 to 96455411 14 + TSS region transcription start site region 161570
Tssr161571 X 96455412 to 96455450 38 + TSS region transcription start site region 161571
Heph X 96455436 to 96574485 119049 + protein coding gene hephaestin
Tssr161572 X 96455496 to 96455497 1 + TSS region transcription start site region 161572
Tssr5650 X 96455502 to 96455505 3 + TSS region transcription start site region 5650
Tssr161573 X 96455511 to 96455522 11 + TSS region transcription start site region 161573
Tssr161574 X 96455529 to 96455599 70 + TSS region transcription start site region 161574
Tssr161575 X 96455612 to 96455636 24 + TSS region transcription start site region 161575
Tssr161576 X 96456344 to 96456356 12 + TSS region transcription start site region 161576
Tssr161577 X 96456362 to 96456388 26 + TSS region transcription start site region 161577
Tssr161578 X 96456404 to 96456441 37 + TSS region transcription start site region 161578
Tssr161579 X 96456490 to 96456502 12 + TSS region transcription start site region 161579
Rpl17-ps8 X 96484859 to 96485479 620 + pseudogene ribosomal protein L17, pseudogene 8