Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:95149832-96110366

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63 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Arhgef9 X 95048930 to 95196851 147921 - protein coding gene CDC42 guanine nucleotide exchange factor (GEF) 9
5730407O05Rik X 95159095 to 95160855 1760 unclassified gene RIKEN cDNA 5730407O05 gene
Tssr163797 X 95166343 to 95166426 83 - TSS region transcription start site region 163797
Cpgi22839 X 95166449 to 95166611 162 CpG island CpG island 22839
Cpgi22840 X 95196401 to 95196617 216 CpG island CpG island 22840
Tssr163798 X 95196450 to 95196519 69 - TSS region transcription start site region 163798
Tssr163799 X 95196604 to 95196694 90 - TSS region transcription start site region 163799
Gm6092 X 95211186 to 95211777 591 - pseudogene predicted gene 6092
Tssr163800 X 95211788 to 95211802 14 - TSS region transcription start site region 163800
Gm14807 X 95252916 to 95253898 982 - pseudogene predicted gene 14807
Gm3712 X 95321317 to 95321823 506 - pseudogene predicted gene 3712
Tssr161496 X 95325136 to 95325139 3 + TSS region transcription start site region 161496
Gm14806 X 95381861 to 95382436 575 - pseudogene predicted gene 14806
Amer1 X 95420313 to 95444840 24527 - protein coding gene APC membrane recruitment 1
Cpgi22841 X 95444406 to 95445020 614 CpG island CpG island 22841
Tssr163801 X 95444765 to 95444777 12 - TSS region transcription start site region 163801
Tssr163802 X 95444789 to 95444829 40 - TSS region transcription start site region 163802
Gm18664 X 95467664 to 95468166 502 - pseudogene predicted gene, 18664
Asb12 X 95470201 to 95557987 87786 - protein coding gene ankyrin repeat and SOCS box-containing 12
Tssr163803 X 95478076 to 95478087 11 - TSS region transcription start site region 163803
Tssr163804 X 95478107 to 95478137 30 - TSS region transcription start site region 163804
Tssr161497 X 95558099 to 95558108 9 + TSS region transcription start site region 161497
Pfn5 X 95558104 to 95558803 699 + protein coding gene profilin 5
Tssr161498 X 95558193 to 95558196 3 + TSS region transcription start site region 161498
Gm9043 X 95629832 to 95630366 534 + pseudogene predicted gene 9043
Zc4h2 X 95639193 to 95658509 19316 - protein coding gene zinc finger, C4H2 domain containing
Tssr163805 X 95658310 to 95658344 34 - TSS region transcription start site region 163805
Tssr163806 X 95658379 to 95658390 11 - TSS region transcription start site region 163806
Tssr163807 X 95658392 to 95658412 20 - TSS region transcription start site region 163807
Tssr163808 X 95658416 to 95658447 31 - TSS region transcription start site region 163808
Gm18108 X 95681479 to 95682864 1385 - pseudogene predicted gene, 18108
Gm29889 X 95683751 to 95692806 9055 - pseudogene predicted gene, 29889
Cpgi22842 X 95711551 to 95712058 507 CpG island CpG island 22842
Tssr161499 X 95711641 to 95711685 44 + TSS region transcription start site region 161499
Zc3h12b X 95711678 to 95932637 220959 + protein coding gene zinc finger CCCH-type containing 12B
Tssr161500 X 95711686 to 95711712 26 + TSS region transcription start site region 161500
1700010D01Rik X 95732590 to 95733265 675 - lincRNA gene RIKEN cDNA 1700010D01 gene
Gm18239 X 95794799 to 95795433 634 - pseudogene predicted gene, 18239
Las1l X 95935335 to 95956962 21627 - protein coding gene LAS1-like (S. cerevisiae)
Cpgi22843 X 95956585 to 95957107 522 CpG island CpG island 22843
Tssr163809 X 95956890 to 95956918 28 - TSS region transcription start site region 163809
Tssr163810 X 95956919 to 95956948 29 - TSS region transcription start site region 163810
Tssr163811 X 95965029 to 95965038 9 - TSS region transcription start site region 163811
Tssr163812 X 95965046 to 95965059 13 - TSS region transcription start site region 163812
Tssr163813 X 95965070 to 95965093 23 - TSS region transcription start site region 163813
Tssr163814 X 95965192 to 95965230 38 - TSS region transcription start site region 163814
Tssr161501 X 95968900 to 95968907 7 + TSS region transcription start site region 161501
Tssr163815 X 95970083 to 95970092 9 - TSS region transcription start site region 163815
Gm41897 X 95981913 to 95986705 4792 - lncRNA gene predicted gene, 41897
Gm19635 X 95992961 to 95994067 1106 + pseudogene predicted gene, 19635
Cpgi22844 X 96095840 to 96096333 493 CpG island CpG island 22844
Tssr161502 X 96095992 to 96096003 11 + TSS region transcription start site region 161502
Tssr161503 X 96096007 to 96096016 9 + TSS region transcription start site region 161503
Tssr161504 X 96096034 to 96096056 22 + TSS region transcription start site region 161504
Msn X 96096045 to 96168553 72508 + protein coding gene moesin
Tssr161505 X 96096058 to 96096077 19 + TSS region transcription start site region 161505
Tssr161506 X 96096082 to 96096116 34 + TSS region transcription start site region 161506
Tssr161507 X 96096117 to 96096128 11 + TSS region transcription start site region 161507
Tssr161508 X 96097530 to 96097535 5 + TSS region transcription start site region 161508
Tssr161509 X 96097822 to 96097826 4 + TSS region transcription start site region 161509
Tssr161510 X 96099459 to 96099465 6 + TSS region transcription start site region 161510
Gm30427 X 96105199 to 96109114 3915 + lncRNA gene predicted gene, 30427
Tssr161511 X 96107045 to 96107051 6 + TSS region transcription start site region 161511