Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:9464703-10235252

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51 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cybb X 9435252 to 9487766 52514 - protein coding gene cytochrome b-245, beta polypeptide
Tssr162954 X 9465296 to 9465319 23 - TSS region transcription start site region 162954
Tssr162955 X 9465400 to 9465411 11 - TSS region transcription start site region 162955
Tssr162956 X 9465632 to 9465648 16 - TSS region transcription start site region 162956
Tssr162957 X 9465672 to 9465762 90 - TSS region transcription start site region 162957
Tssr5588 X 9465736 to 9465750 14 + TSS region transcription start site region 5588
Tssr162958 X 9466727 to 9466731 4 - TSS region transcription start site region 162958
Tssr162959 X 9467104 to 9467192 88 - TSS region transcription start site region 162959
Tssr162960 X 9467231 to 9467240 9 - TSS region transcription start site region 162960
Tssr162961 X 9467895 to 9467919 24 - TSS region transcription start site region 162961
Tssr162962 X 9467990 to 9467996 6 - TSS region transcription start site region 162962
Tssr162963 X 9469250 to 9469281 31 - TSS region transcription start site region 162963
Tssr162964 X 9469288 to 9469331 43 - TSS region transcription start site region 162964
Tssr162965 X 9469436 to 9469446 10 - TSS region transcription start site region 162965
Tssr162966 X 9469480 to 9469504 24 - TSS region transcription start site region 162966
Tssr162967 X 9471026 to 9471029 3 - TSS region transcription start site region 162967
Tssr160524 X 9480566 to 9480570 4 + TSS region transcription start site region 160524
Gm33784 X 9480573 to 9484526 3953 + lncRNA gene predicted gene, 33784
Tssr160525 X 9490380 to 9490383 3 + TSS region transcription start site region 160525
Tssr162968 X 9516298 to 9516300 2 - TSS region transcription start site region 162968
DXMit124b X 9516981 to 9517149 168 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 124b
Gm25728 X 9532511 to 9532669 158 - snRNA gene predicted gene, 25728
H2al1o X 9571960 to 9572391 431 - protein coding gene H2A histone family member L1O
Dynlt3 X 9654270 to 9662983 8713 - protein coding gene dynein light chain Tctex-type 3
Tssr162969 X 9655161 to 9655191 30 - TSS region transcription start site region 162969
Tssr162970 X 9655609 to 9655621 12 - TSS region transcription start site region 162970
Tssr162971 X 9655659 to 9655672 13 - TSS region transcription start site region 162971
Tssr162972 X 9655944 to 9655965 21 - TSS region transcription start site region 162972
Tssr162973 X 9656013 to 9656048 35 - TSS region transcription start site region 162973
Tssr162974 X 9662902 to 9662942 40 - TSS region transcription start site region 162974
Tssr162975 X 9662950 to 9662970 20 - TSS region transcription start site region 162975
Tssr160526 X 9747708 to 9747747 39 + TSS region transcription start site region 160526
Tssr160527 X 9747755 to 9747779 24 + TSS region transcription start site region 160527
Tssr5589 X 9747794 to 9747804 10 + TSS region transcription start site region 5589
Tssr160528 X 9846945 to 9846977 32 + TSS region transcription start site region 160528
Hypm X 9846947 to 9847500 553 + protein coding gene huntingtin interacting protein M
H2al3 X 9849703 to 9850252 549 + protein coding gene H2A histone family member L3
Tssr160529 X 9849707 to 9849710 3 + TSS region transcription start site region 160529
Tssr5590 X 9862099 to 9862115 16 + TSS region transcription start site region 5590
Tssr160530 X 9862130 to 9862143 13 + TSS region transcription start site region 160530
Sytl5 X 9885622 to 9994543 108921 + protein coding gene synaptotagmin-like 5
Gm39493 X 9933835 to 9939308 5473 - lncRNA gene predicted gene, 39493
Gm5754 X 10011788 to 10012679 891 + pseudogene predicted gene 5754
Srpx X 10037977 to 10117661 79684 - protein coding gene sushi-repeat-containing protein
Tssr162976 X 10117597 to 10117677 80 - TSS region transcription start site region 162976
Gm33844 X 10117838 to 10120004 2166 + lncRNA gene predicted gene, 33844
Rpgr X 10158216 to 10216795 58579 - protein coding gene retinitis pigmentosa GTPase regulator
Tssr162977 X 10216437 to 10216482 45 - TSS region transcription start site region 162977
Cpgi22600 X 10216460 to 10216967 507 CpG island CpG island 22600
Tssr162978 X 10216685 to 10216765 80 - TSS region transcription start site region 162978
Tssr162979 X 10216918 to 10216921 3 - TSS region transcription start site region 162979