Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:94345243-94735260

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40 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Fam90a1b X 94355053 to 94366777 11724 - protein coding gene family with sequence similarity 90, member A1B
Cpgi22833 X 94366651 to 94367230 579 CpG island CpG island 22833
Tssr163783 X 94366852 to 94366862 10 - TSS region transcription start site region 163783
Tssr161489 X 94367112 to 94367134 22 + TSS region transcription start site region 161489
Apoo X 94367117 to 94417093 49976 + protein coding gene apolipoprotein O
Tssr161490 X 94367147 to 94367165 18 + TSS region transcription start site region 161490
Gm44477 X 94394818 to 94394927 109 - miRNA gene predicted gene, 44477
Gm36131 X 94417773 to 94441811 24038 + lncRNA gene predicted gene, 36131
Gm9003 X 94422678 to 94423295 617 - pseudogene predicted pseudogene 9003
Gm14827 X 94442732 to 94447727 4995 + lincRNA gene predicted gene 14827
Gm18919 X 94443154 to 94443902 748 - pseudogene predicted gene, 18919
Gm24595 X 94455010 to 94455119 109 - snoRNA gene predicted gene, 24595
Tssr163784 X 94459774 to 94459776 2 - TSS region transcription start site region 163784
Tssr161491 X 94481885 to 94481886 1 + TSS region transcription start site region 161491
Maged1 X 94535474 to 94542074 6600 - protein coding gene melanoma antigen, family D, 1
Tssr163785 X 94537348 to 94537357 9 - TSS region transcription start site region 163785
Tssr163786 X 94539082 to 94539094 12 - TSS region transcription start site region 163786
Tssr163787 X 94540216 to 94540239 23 - TSS region transcription start site region 163787
Tssr163788 X 94540243 to 94540260 17 - TSS region transcription start site region 163788
Tssr163789 X 94540306 to 94540321 15 - TSS region transcription start site region 163789
Tssr163790 X 94540403 to 94540422 19 - TSS region transcription start site region 163790
Tssr163791 X 94540431 to 94540444 13 - TSS region transcription start site region 163791
Cpgi22834 X 94541269 to 94542344 1075 CpG island CpG island 22834
Tssr163792 X 94541984 to 94542031 47 - TSS region transcription start site region 163792
Tssr163793 X 94542037 to 94542042 5 - TSS region transcription start site region 163793
Tssr163794 X 94542063 to 94542072 9 - TSS region transcription start site region 163794
Gm9005 X 94546963 to 94547569 606 - pseudogene predicted gene 9005
Gm18110 X 94552440 to 94553498 1058 + pseudogene predicted gene, 18110
Gm14831 X 94557341 to 94557749 408 + pseudogene predicted gene 14831
Gm5401 X 94608219 to 94608696 477 - pseudogene predicted pseudogene 5401
Gm9009 X 94615800 to 94616125 325 + pseudogene predicted pseudogene 9009
Cpgi22835 X 94635969 to 94636626 657 CpG island CpG island 22835
Tssr161492 X 94636044 to 94636053 9 + TSS region transcription start site region 161492
Tssr161493 X 94636066 to 94636086 20 + TSS region transcription start site region 161493
Gspt2 X 94636069 to 94638562 2493 + protein coding gene G1 to S phase transition 2
Tssr161494 X 94636100 to 94636111 11 + TSS region transcription start site region 161494
Gm5402 X 94671503 to 94673120 1617 - pseudogene predicted gene 5402
DXMit113a X 94700904 to 94700997 93 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 113a
Zxdb X 94724569 to 94730187 5618 + protein coding gene zinc finger, X-linked, duplicated B
Gm39526 X 94731399 to 94745359 13960 + lincRNA gene predicted gene, 39526