Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:93974631-94223702

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30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
exma X 82948870 to 94123702 11174832 heritable phenotypic marker exencephaly and severe microphthalmia/anophthalmia
AU015836 X 93968659 to 93975470 6811 + protein coding gene expressed sequence AU015836
Cpgi22827 X 93980561 to 93980979 418 CpG island CpG island 22827
Gm14790 X 93981069 to 93982469 1400 - pseudogene predicted gene 14790
Gm4990 X 93981099 to 93982499 1400 + pseudogene predicted gene 4990
Gm15165 X 93988318 to 93988819 501 - pseudogene predicted gene 15165
Cpgi22828 X 93988721 to 93988905 184 CpG island CpG island 22828
Tssr161483 X 94023812 to 94023822 10 + TSS region transcription start site region 161483
Gm6987 X 94023860 to 94024626 766 + pseudogene predicted pseudogene 6987
Gm14798 X 94028854 to 94099304 70450 + antisense lncRNA gene predicted gene 14798
Zfx X 94074631 to 94123702 49071 - protein coding gene zinc finger protein X-linked
Cpgi22829 X 94122224 to 94123711 1487 CpG island CpG island 22829
Tssr163772 X 94122320 to 94122326 6 - TSS region transcription start site region 163772
Tssr163773 X 94123087 to 94123159 72 - TSS region transcription start site region 163773
Tssr163774 X 94123165 to 94123177 12 - TSS region transcription start site region 163774
Tssr161484 X 94123201 to 94123242 41 + TSS region transcription start site region 161484
Tssr163775 X 94123359 to 94123412 53 - TSS region transcription start site region 163775
Tssr163776 X 94123434 to 94123445 11 - TSS region transcription start site region 163776
DXMit6 X 94123636 to 94123841 205 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 6
Gm46691 X 94125249 to 94140487 15238 - lncRNA gene predicted gene, 46691
Tssr163777 X 94136105 to 94136109 4 - TSS region transcription start site region 163777
Tssr163778 X 94150631 to 94150638 7 - TSS region transcription start site region 163778
DXMit63 X 94156856 to 94156978 122 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 63
Cpgi22830 X 94177624 to 94178299 675 CpG island CpG island 22830
Tssr163779 X 94177853 to 94177864 11 - TSS region transcription start site region 163779
Eif2s3x X 94188709 to 94212651 23942 - protein coding gene eukaryotic translation initiation factor 2, subunit 3, structural gene X-linked
Cpgi22831 X 94212490 to 94213295 805 CpG island CpG island 22831
Tssr163780 X 94212638 to 94212662 24 - TSS region transcription start site region 163780
Tssr163781 X 94212685 to 94212696 11 - TSS region transcription start site region 163781
Tssr163782 X 94212905 to 94212922 17 - TSS region transcription start site region 163782