Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:93811099-94152499

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39 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
exma X 82948870 to 94123702 11174832 heritable phenotypic marker exencephaly and severe microphthalmia/anophthalmia
Pdk3 X 93764616 to 93832095 67479 - protein coding gene pyruvate dehydrogenase kinase, isoenzyme 3
Gm46689 X 93826008 to 93827308 1300 - lncRNA gene predicted gene, 46689
Cpgi22824 X 93831625 to 93832438 813 CpG island CpG island 22824
Tssr163766 X 93831893 to 93831904 11 - TSS region transcription start site region 163766
Tssr163767 X 93832020 to 93832031 11 - TSS region transcription start site region 163767
Tssr5648 X 93832084 to 93832094 10 - TSS region transcription start site region 5648
Tssr163768 X 93832106 to 93832199 93 - TSS region transcription start site region 163768
Tssr163769 X 93832666 to 93832681 15 - TSS region transcription start site region 163769
Tssr163770 X 93832701 to 93832713 12 - TSS region transcription start site region 163770
Supt20-ps X 93921167 to 93921941 774 - pseudogene suppressor of Ty 20, pseudogene
Cpgi22825 X 93922125 to 93922473 348 CpG island CpG island 22825
Cpgi22826 X 93922792 to 93922948 156 CpG island CpG island 22826
Tssr163771 X 93923007 to 93923012 5 - TSS region transcription start site region 163771
Gm15164 X 93931561 to 93931831 270 + pseudogene predicted gene 15164
Tssr161481 X 93968649 to 93968675 26 + TSS region transcription start site region 161481
AU015836 X 93968659 to 93975470 6811 + protein coding gene expressed sequence AU015836
Tssr161482 X 93968682 to 93968689 7 + TSS region transcription start site region 161482
Tssr5649 X 93969202 to 93969224 22 + TSS region transcription start site region 5649
Cpgi22827 X 93980561 to 93980979 418 CpG island CpG island 22827
Gm14790 X 93981069 to 93982469 1400 - pseudogene predicted gene 14790
Gm4990 X 93981099 to 93982499 1400 + pseudogene predicted gene 4990
Gm15165 X 93988318 to 93988819 501 - pseudogene predicted gene 15165
Cpgi22828 X 93988721 to 93988905 184 CpG island CpG island 22828
Tssr161483 X 94023812 to 94023822 10 + TSS region transcription start site region 161483
Gm6987 X 94023860 to 94024626 766 + pseudogene predicted pseudogene 6987
Gm14798 X 94028854 to 94099304 70450 + antisense lncRNA gene predicted gene 14798
Zfx X 94074631 to 94123702 49071 - protein coding gene zinc finger protein X-linked
Cpgi22829 X 94122224 to 94123711 1487 CpG island CpG island 22829
Tssr163772 X 94122320 to 94122326 6 - TSS region transcription start site region 163772
Tssr163773 X 94123087 to 94123159 72 - TSS region transcription start site region 163773
Tssr163774 X 94123165 to 94123177 12 - TSS region transcription start site region 163774
Tssr161484 X 94123201 to 94123242 41 + TSS region transcription start site region 161484
Tssr163775 X 94123359 to 94123412 53 - TSS region transcription start site region 163775
Tssr163776 X 94123434 to 94123445 11 - TSS region transcription start site region 163776
DXMit6 X 94123636 to 94123841 205 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 6
Gm46691 X 94125249 to 94140487 15238 - lncRNA gene predicted gene, 46691
Tssr163777 X 94136105 to 94136109 4 - TSS region transcription start site region 163777
Tssr163778 X 94150631 to 94150638 7 - TSS region transcription start site region 163778