Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:88102232-89112236

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28 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Il1rapl1 X 86747242 to 88115623 1368381 - protein coding gene interleukin 1 receptor accessory protein-like 1
Tssr163752 X 88115597 to 88115626 29 - TSS region transcription start site region 163752
Tssr163753 X 88115632 to 88115675 43 - TSS region transcription start site region 163753
Tssr163754 X 88115903 to 88115928 25 - TSS region transcription start site region 163754
Tssr163755 X 88115937 to 88115956 19 - TSS region transcription start site region 163755
Gm25006 X 88192617 to 88192723 106 + snRNA gene predicted gene, 25006
Gm8858 X 88388559 to 88388900 341 + pseudogene predicted gene 8858
Gm14793 X 88393954 to 88394264 310 + pseudogene predicted gene 14793
Gm8864 X 88572051 to 88573060 1009 - pseudogene predicted gene 8864
Tssr161459 X 88580383 to 88580387 4 + TSS region transcription start site region 161459
Tssr161460 X 88607232 to 88607236 4 + TSS region transcription start site region 161460
Gm14795 X 88613357 to 88613827 470 + pseudogene predicted gene 14795
Gm14792 X 88684764 to 88685021 257 - pseudogene predicted gene 14792
Ppp4r3c-ps X 88729873 to 88732272 2399 + pseudogene protein phosphatase 4 regulatory subunit 3C, pseudogene
Gm14794 X 88749452 to 88749643 191 + pseudogene predicted gene 14794
Gm8876 X 88755577 to 88756695 1118 - pseudogene predicted gene 8876
Gm27000 X 88759471 to 88760312 841 - lincRNA gene predicted gene, 27000
Mir1906-2 X 88759474 to 88759553 79 - miRNA gene microRNA 1906-2
Gm27335 X 88759659 to 88759755 96 - unclassified non-coding RNA gene predicted gene, 27335
Tssr163756 X 88760221 to 88760248 27 - TSS region transcription start site region 163756
Tssr163757 X 88760318 to 88760319 1 - TSS region transcription start site region 163757
Gm5759 X 88897696 to 88898491 795 - pseudogene predicted gene 5759
Tssr161461 X 88959183 to 88959184 1 + TSS region transcription start site region 161461
Gm8880 X 88959217 to 88959670 453 + pseudogene predicted gene 8880
Gm16412 X 89005370 to 89005642 272 + pseudogene predicted pseudogene 16412
Gm14791 X 89059376 to 89060541 1165 - pseudogene predicted gene 14791
Gm14796 X 89087096 to 89088054 958 - pseudogene predicted gene 14796
Gm14797 X 89111017 to 89112496 1479 - pseudogene predicted gene 14797