Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:86420870-88435645

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Spha2 X 40832621 to 87216531 46383910 QTL sperm head anomaly 2
Gm39524 X 86713268 to 86722630 9362 - lncRNA gene predicted gene, 39524
Tssr163742 X 86746564 to 86746566 2 - TSS region transcription start site region 163742
Il1rapl1 X 86747242 to 88115623 1368381 - protein coding gene interleukin 1 receptor accessory protein-like 1
Tssr161455 X 86770468 to 86770475 7 + TSS region transcription start site region 161455
Gm14775 X 86792474 to 86792783 309 + pseudogene predicted gene 14775
Tssr163743 X 86997672 to 86997676 4 - TSS region transcription start site region 163743
DXMit93 X 87069402 to 87069601 199 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 93
Tssr163744 X 87172888 to 87172898 10 - TSS region transcription start site region 163744
DXMit147 X 87216315 to 87216531 216 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 147
Tssr163745 X 87238125 to 87238129 4 - TSS region transcription start site region 163745
Tssr161456 X 87238348 to 87238364 16 + TSS region transcription start site region 161456
Tssr161457 X 87238370 to 87238377 7 + TSS region transcription start site region 161457
Tssr163746 X 87238375 to 87238416 41 - TSS region transcription start site region 163746
Tssr163747 X 87268852 to 87268855 3 - TSS region transcription start site region 163747
Gm18920 X 87322642 to 87323173 531 + pseudogene predicted gene, 18920
Gm18794 X 87519324 to 87520312 988 - pseudogene predicted gene, 18794
Gm8855 X 87672992 to 87673810 818 - pseudogene predicted gene 8855
2900005I04Rik X 87680714 to 87681826 1112 unclassified non-coding RNA gene RIKEN cDNA 2900005I04 gene
Tssr163748 X 87762703 to 87762707 4 - TSS region transcription start site region 163748
Tssr163749 X 87763749 to 87763772 23 - TSS region transcription start site region 163749
Gm14776 X 87771462 to 87772286 824 - pseudogene predicted gene 14776
Tssr163750 X 87779696 to 87779700 4 - TSS region transcription start site region 163750
Tssr163751 X 87854215 to 87854228 13 - TSS region transcription start site region 163751
Gm24812 X 87899205 to 87899488 283 - unclassified non-coding RNA gene predicted gene, 24812
Tssr161458 X 87921150 to 87921153 3 + TSS region transcription start site region 161458
Gm14774 X 88036371 to 88036906 535 - pseudogene predicted gene 14774
Tssr163752 X 88115597 to 88115626 29 - TSS region transcription start site region 163752
Tssr163753 X 88115632 to 88115675 43 - TSS region transcription start site region 163753
Tssr163754 X 88115903 to 88115928 25 - TSS region transcription start site region 163754
Tssr163755 X 88115937 to 88115956 19 - TSS region transcription start site region 163755
Gm25006 X 88192617 to 88192723 106 + snRNA gene predicted gene, 25006
Gm8858 X 88388559 to 88388900 341 + pseudogene predicted gene 8858
Gm14793 X 88393954 to 88394264 310 + pseudogene predicted gene 14793