MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region X:85834186-86254203

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17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Tssr161445	X	85870221 to 85870251	30	+	TSS region	transcription start site region 161445
Tssr161446	X	85870266 to 85870297	31	+	TSS region	transcription start site region 161446
Tssr161447	X	85870324 to 85870335	11	+	TSS region	transcription start site region 161447
5430427O19Rik	X	85870354 to 85891499	21145	+	protein coding gene	RIKEN cDNA 5430427O19 gene
Tssr161448	X	85870378 to 85870389	11	+	TSS region	transcription start site region 161448
Tssr161449	X	85870705 to 85870713	8	+	TSS region	transcription start site region 161449
Tssr161450	X	85871723 to 85871728	5	+	TSS region	transcription start site region 161450
Tssr163739	X	85886761 to 85886775	14	-	TSS region	transcription start site region 163739
Gm14772	X	86032656 to 86033169	513	-	pseudogene	predicted gene 14772
Tssr161451	X	86044186 to 86044203	17	+	TSS region	transcription start site region 161451
Samt3	X	86044199 to 86047313	3114	+	protein coding gene	spermatogenesis associated multipass transmembrane protein 3
Tssr161452	X	86044204 to 86044214	10	+	TSS region	transcription start site region 161452
Cpgi22818	X	86191686 to 86192760	1074		CpG island	CpG island 22818
Tssr161453	X	86191731 to 86191739	8	+	TSS region	transcription start site region 161453
Tssr161454	X	86191766 to 86191782	16	+	TSS region	transcription start site region 161454
Nr0b1	X	86191775 to 86195947	4172	+	protein coding gene	nuclear receptor subfamily 0, group B, member 1
Mageb4	X	86250256 to 86256219	5963	-	protein coding gene	melanoma antigen, family B, 4