Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:85461937-86016819

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
DXMit195 X 85553610 to 85553700 90 DNA segment DNA Segment, Chr X, Massachusetts Institute of Technology 195
Cpgi22816 X 85573659 to 85574563 904 CpG island CpG island 22816
Tssr161439 X 85573983 to 85574017 34 + TSS region transcription start site region 161439
Tssr161440 X 85574018 to 85574039 21 + TSS region transcription start site region 161440
Tab3 X 85574022 to 85634469 60447 + protein coding gene TGF-beta activated kinase 1/MAP3K7 binding protein 3
Gm44378 X 85588977 to 85589059 82 + miRNA gene predicted gene, 44378
Gm39523 X 85609354 to 85614228 4874 - lncRNA gene predicted gene, 39523
Tssr161441 X 85614609 to 85614626 17 + TSS region transcription start site region 161441
Tssr163732 X 85700357 to 85700363 6 - TSS region transcription start site region 163732
Gk X 85701937 to 85776819 74882 - protein coding gene glycerol kinase
Gm14767 X 85716438 to 85717023 585 + pseudogene predicted gene 14767
Tssr161442 X 85716540 to 85716551 11 + TSS region transcription start site region 161442
E130114A11Rik X 85733875 to 85736831 2956 unclassified gene RIKEN cDNA E130114A11 gene
Tssr163733 X 85738707 to 85738744 37 - TSS region transcription start site region 163733
Gm14764 X 85744348 to 85749764 5416 + antisense lncRNA gene predicted gene 14764
Tssr163734 X 85775619 to 85775622 3 - TSS region transcription start site region 163734
Cpgi22817 X 85776330 to 85777254 924 CpG island CpG island 22817
Tssr163735 X 85776537 to 85776548 11 - TSS region transcription start site region 163735
Tssr163736 X 85776555 to 85776580 25 - TSS region transcription start site region 163736
Tssr163737 X 85776606 to 85776643 37 - TSS region transcription start site region 163737
Tssr163738 X 85776644 to 85776658 14 - TSS region transcription start site region 163738
Tssr161443 X 85776934 to 85776958 24 + TSS region transcription start site region 161443
Tssr161444 X 85777010 to 85777020 10 + TSS region transcription start site region 161444
Gm14766 X 85790873 to 85791239 366 + pseudogene predicted gene 14766
Gm6964 X 85793684 to 85794120 436 - pseudogene predicted gene 6964
Gm14761 X 85823168 to 85823429 261 + pseudogene predicted gene 14761
Gm14762 X 85825236 to 85827656 2420 + lincRNA gene predicted gene 14762
Tssr161445 X 85870221 to 85870251 30 + TSS region transcription start site region 161445
Tssr161446 X 85870266 to 85870297 31 + TSS region transcription start site region 161446
Tssr161447 X 85870324 to 85870335 11 + TSS region transcription start site region 161447
5430427O19Rik X 85870354 to 85891499 21145 + protein coding gene RIKEN cDNA 5430427O19 gene
Tssr161448 X 85870378 to 85870389 11 + TSS region transcription start site region 161448
Tssr161449 X 85870705 to 85870713 8 + TSS region transcription start site region 161449
Tssr161450 X 85871723 to 85871728 5 + TSS region transcription start site region 161450
Tssr163739 X 85886761 to 85886775 14 - TSS region transcription start site region 163739