MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region X:8272608-8818255

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Slc38a5	X	8271381 to 8280179	8798	+	protein coding gene	solute carrier family 38, member 5
Tssr160500	X	8276132 to 8276144	12	+	TSS region	transcription start site region 160500
Tssr160501	X	8276578 to 8276604	26	+	TSS region	transcription start site region 160501
Tssr160502	X	8276771 to 8276779	8	+	TSS region	transcription start site region 160502
Tssr160503	X	8277680 to 8277700	20	+	TSS region	transcription start site region 160503
Ssxb10	X	8327424 to 8336235	8811	+	protein coding gene	synovial sarcoma, X member B10
Ssxb9	X	8366978 to 8375388	8410	+	protein coding gene	synovial sarcoma, X member B9
Ssxb1	X	8413305 to 8422157	8852	+	protein coding gene	synovial sarcoma, X member B1
Ssxb2	X	8454345 to 8461726	7381	-	protein coding gene	synovial sarcoma, X member B2
Gm14459	X	8514052 to 8524954	10902	-	protein coding gene	predicted gene 14459
Ssxb6	X	8542608 to 8548255	5647	-	protein coding gene	synovial sarcoma, X member B6
Ssxb3	X	8583404 to 8591810	8406	-	protein coding gene	synovial sarcoma, X member B3
Gm14500	X	8604420 to 8604532	112	+	pseudogene	predicted gene 14500
Gm6797	X	8639622 to 8645273	5651	+	pseudogene	predicted pseudogene 6797
Gm6798	X	8654466 to 8654825	359	+	pseudogene	predicted gene 6798
Gm9430	X	8662302 to 8663828	1526	-	pseudogene	predicted gene 9430
Ssxb8	X	8684887 to 8690844	5957	-	protein coding gene	synovial sarcoma, X member B8
Ssx9	X	8748432 to 8754587	6155	+	protein coding gene	synovial sarcoma, X 9
Ssxb5	X	8803691 to 8809386	5695	+	protein coding gene	synovial sarcoma, X member B5