Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:8137616-8247990

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23 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rbm3 X 8138975 to 8145880 6905 - protein coding gene RNA binding motif (RNP1, RRM) protein 3
Cpgi22592 X 8145238 to 8145854 616 CpG island CpG island 22592
Tssr5587 X 8145244 to 8145286 42 - TSS region transcription start site region 5587
Rbm3os X 8145429 to 8147964 2535 + antisense lncRNA gene RNA binding motif protein 3, opposite strand
Tssr162857 X 8145696 to 8145707 11 - TSS region transcription start site region 162857
Tssr162858 X 8145713 to 8145731 18 - TSS region transcription start site region 162858
Tbc1d25 X 8154472 to 8176181 21709 - protein coding gene TBC1 domain family, member 25
Cpgi22593 X 8175412 to 8176113 701 CpG island CpG island 22593
Tssr162859 X 8175890 to 8175956 66 - TSS region transcription start site region 162859
Ebp X 8185329 to 8193512 8183 - protein coding gene phenylalkylamine Ca2+ antagonist (emopamil) binding protein
Tssr162860 X 8190235 to 8190257 22 - TSS region transcription start site region 162860
Cpgi22594 X 8192616 to 8192990 374 CpG island CpG island 22594
Tssr162861 X 8192828 to 8192881 53 - TSS region transcription start site region 162861
Tssr162862 X 8192892 to 8192908 16 - TSS region transcription start site region 162862
Tssr162863 X 8193360 to 8193385 25 - TSS region transcription start site region 162863
Tssr162864 X 8193387 to 8193397 10 - TSS region transcription start site region 162864
Porcn X 8193848 to 8206525 12677 - protein coding gene porcupine O-acyltransferase
Tssr162865 X 8203184 to 8203213 29 - TSS region transcription start site region 162865
Gm33135 X 8205707 to 8217912 12205 + lncRNA gene predicted gene, 33135
Cpgi22595 X 8206088 to 8206741 653 CpG island CpG island 22595
Tssr162866 X 8206475 to 8206547 72 - TSS region transcription start site region 162866
Ftsj1 X 8238668 to 8252406 13738 - protein coding gene FtsJ RNA methyltransferase homolog 1 (E. coli)
DXImx6 X 8244432 to 8244721 289 DNA segment DNA segment, Chr X, Immunex 6